Protein–RNA interactions for Protein: Q99KG7

Hps4, Hermansky-Pudlak syndrome 4 protein homolog, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps4Q99KG7 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hps4Q99KG7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hps4Q99KG7 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Hps4Q99KG7 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Hps4Q99KG7 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hps4Q99KG7 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hps4Q99KG7 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.4■□□□□ 0.54
Hps4Q99KG7 Gm17271-201ENSMUST00000165535 355 ntBASIC18.4■□□□□ 0.54
Hps4Q99KG7 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.4■□□□□ 0.54
Hps4Q99KG7 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.4■□□□□ 0.54
Hps4Q99KG7 Gm17968-201ENSMUST00000194902 784 ntBASIC18.4■□□□□ 0.54
Hps4Q99KG7 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.4■□□□□ 0.54
Hps4Q99KG7 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.4■□□□□ 0.54
Hps4Q99KG7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hps4Q99KG7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Hps4Q99KG7 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hps4Q99KG7 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Hps4Q99KG7 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hps4Q99KG7 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Hps4Q99KG7 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hps4Q99KG7 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.4■□□□□ 0.54
Hps4Q99KG7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hps4Q99KG7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hps4Q99KG7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hps4Q99KG7 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hps4Q99KG7 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hps4Q99KG7 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hps4Q99KG7 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hps4Q99KG7 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Hps4Q99KG7 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hps4Q99KG7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hps4Q99KG7 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hps4Q99KG7 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hps4Q99KG7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hps4Q99KG7 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hps4Q99KG7 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.39■□□□□ 0.53
Hps4Q99KG7 Gm26308-201ENSMUST00000157768 69 ntBASIC18.39■□□□□ 0.53
Hps4Q99KG7 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.39■□□□□ 0.53
Hps4Q99KG7 Gm44492-201ENSMUST00000197012 141 ntBASIC18.39■□□□□ 0.53
Hps4Q99KG7 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hps4Q99KG7 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hps4Q99KG7 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hps4Q99KG7 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hps4Q99KG7 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Hps4Q99KG7 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hps4Q99KG7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hps4Q99KG7 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hps4Q99KG7 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hps4Q99KG7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hps4Q99KG7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hps4Q99KG7 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hps4Q99KG7 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Hps4Q99KG7 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.38■□□□□ 0.53
Hps4Q99KG7 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.38■□□□□ 0.53
Hps4Q99KG7 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.38■□□□□ 0.53
Hps4Q99KG7 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.38■□□□□ 0.53
Hps4Q99KG7 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hps4Q99KG7 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hps4Q99KG7 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hps4Q99KG7 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Hps4Q99KG7 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hps4Q99KG7 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hps4Q99KG7 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.38■□□□□ 0.53
Hps4Q99KG7 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hps4Q99KG7 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hps4Q99KG7 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hps4Q99KG7 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hps4Q99KG7 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hps4Q99KG7 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.38■□□□□ 0.53
Hps4Q99KG7 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.37■□□□□ 0.53
Hps4Q99KG7 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.37■□□□□ 0.53
Hps4Q99KG7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.37■□□□□ 0.53
Hps4Q99KG7 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hps4Q99KG7 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hps4Q99KG7 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hps4Q99KG7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Hps4Q99KG7 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.37■□□□□ 0.53
Hps4Q99KG7 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hps4Q99KG7 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hps4Q99KG7 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hps4Q99KG7 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hps4Q99KG7 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hps4Q99KG7 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hps4Q99KG7 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hps4Q99KG7 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.37■□□□□ 0.53
Hps4Q99KG7 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Hps4Q99KG7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hps4Q99KG7 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hps4Q99KG7 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hps4Q99KG7 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Hps4Q99KG7 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.36■□□□□ 0.53
Hps4Q99KG7 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hps4Q99KG7 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.36■□□□□ 0.53
Hps4Q99KG7 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC18.36■□□□□ 0.53
Hps4Q99KG7 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.36■□□□□ 0.53
Hps4Q99KG7 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.36■□□□□ 0.53
Hps4Q99KG7 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hps4Q99KG7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hps4Q99KG7 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hps4Q99KG7 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms