Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.33□□□□□ -0.12
Lims1Q99JW4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lims1Q99JW4 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lims1Q99JW4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Lims1Q99JW4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lims1Q99JW4 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lims1Q99JW4 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lims1Q99JW4 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lims1Q99JW4 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lims1Q99JW4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lims1Q99JW4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Lims1Q99JW4 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lims1Q99JW4 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lims1Q99JW4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lims1Q99JW4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Lims1Q99JW4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lims1Q99JW4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lims1Q99JW4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lims1Q99JW4 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Lims1Q99JW4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.32□□□□□ -0.12
Lims1Q99JW4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.32□□□□□ -0.12
Lims1Q99JW4 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lims1Q99JW4 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lims1Q99JW4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lims1Q99JW4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lims1Q99JW4 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lims1Q99JW4 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lims1Q99JW4 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lims1Q99JW4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lims1Q99JW4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lims1Q99JW4 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lims1Q99JW4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lims1Q99JW4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lims1Q99JW4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lims1Q99JW4 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lims1Q99JW4 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lims1Q99JW4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lims1Q99JW4 Gm10013-201ENSMUST00000106074 672 ntBASIC14.31□□□□□ -0.12
Lims1Q99JW4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.31□□□□□ -0.12
Lims1Q99JW4 Gm9013-201ENSMUST00000132939 882 ntBASIC14.31□□□□□ -0.12
Lims1Q99JW4 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.31□□□□□ -0.12
Lims1Q99JW4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lims1Q99JW4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Lims1Q99JW4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lims1Q99JW4 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Lims1Q99JW4 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Lims1Q99JW4 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lims1Q99JW4 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Lims1Q99JW4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lims1Q99JW4 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lims1Q99JW4 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lims1Q99JW4 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lims1Q99JW4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lims1Q99JW4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lims1Q99JW4 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.3□□□□□ -0.12
Lims1Q99JW4 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lims1Q99JW4 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lims1Q99JW4 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.3□□□□□ -0.12
Lims1Q99JW4 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lims1Q99JW4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lims1Q99JW4 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lims1Q99JW4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lims1Q99JW4 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Lims1Q99JW4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lims1Q99JW4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.3□□□□□ -0.12
Lims1Q99JW4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lims1Q99JW4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.3□□□□□ -0.12
Lims1Q99JW4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lims1Q99JW4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lims1Q99JW4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lims1Q99JW4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lims1Q99JW4 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lims1Q99JW4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lims1Q99JW4 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lims1Q99JW4 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lims1Q99JW4 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lims1Q99JW4 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.3□□□□□ -0.12
Lims1Q99JW4 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lims1Q99JW4 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lims1Q99JW4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.29□□□□□ -0.12
Lims1Q99JW4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.29□□□□□ -0.12
Lims1Q99JW4 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms