Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Thumpd1Q99J36 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Thumpd1Q99J36 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Thumpd1Q99J36 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Thumpd1Q99J36 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Thumpd1Q99J36 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Thumpd1Q99J36 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Thumpd1Q99J36 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Thumpd1Q99J36 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.02□□□□□ -0.16
Thumpd1Q99J36 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Thumpd1Q99J36 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Thumpd1Q99J36 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Thumpd1Q99J36 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Thumpd1Q99J36 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
Thumpd1Q99J36 Gm26039-201ENSMUST00000158152 144 ntBASIC14.02□□□□□ -0.17
Thumpd1Q99J36 Gm6257-201ENSMUST00000163864 910 ntBASIC14.02□□□□□ -0.17
Thumpd1Q99J36 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thumpd1Q99J36 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thumpd1Q99J36 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Thumpd1Q99J36 Mir1668-201ENSMUST00000184114 107 ntBASIC14.02□□□□□ -0.17
Thumpd1Q99J36 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.02□□□□□ -0.17
Thumpd1Q99J36 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.02□□□□□ -0.17
Thumpd1Q99J36 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thumpd1Q99J36 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.02□□□□□ -0.17
Thumpd1Q99J36 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thumpd1Q99J36 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thumpd1Q99J36 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.02□□□□□ -0.17
Thumpd1Q99J36 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thumpd1Q99J36 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.02□□□□□ -0.17
Thumpd1Q99J36 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thumpd1Q99J36 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thumpd1Q99J36 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Thumpd1Q99J36 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Thumpd1Q99J36 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Thumpd1Q99J36 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Thumpd1Q99J36 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thumpd1Q99J36 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thumpd1Q99J36 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thumpd1Q99J36 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thumpd1Q99J36 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Thumpd1Q99J36 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Thumpd1Q99J36 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14□□□□□ -0.17
Thumpd1Q99J36 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14□□□□□ -0.17
Thumpd1Q99J36 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14□□□□□ -0.17
Thumpd1Q99J36 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Thumpd1Q99J36 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Thumpd1Q99J36 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Thumpd1Q99J36 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Thumpd1Q99J36 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14□□□□□ -0.17
Thumpd1Q99J36 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14□□□□□ -0.17
Thumpd1Q99J36 Gm10653-202ENSMUST00000139570 835 ntBASIC14□□□□□ -0.17
Thumpd1Q99J36 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14□□□□□ -0.17
Thumpd1Q99J36 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14□□□□□ -0.17
Thumpd1Q99J36 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14□□□□□ -0.17
Thumpd1Q99J36 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14□□□□□ -0.17
Thumpd1Q99J36 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14□□□□□ -0.17
Thumpd1Q99J36 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14□□□□□ -0.17
Thumpd1Q99J36 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Thumpd1Q99J36 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14□□□□□ -0.17
Thumpd1Q99J36 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms