Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha11Q91Y19 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha11Q91Y19 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Pcdha11Q91Y19 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha11Q91Y19 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha11Q91Y19 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha11Q91Y19 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdha11Q91Y19 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Pcdha11Q91Y19 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha11Q91Y19 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha11Q91Y19 Gm7222-201ENSMUST00000117512 906 ntBASIC16.49■□□□□ 0.23
Pcdha11Q91Y19 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Pcdha11Q91Y19 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha11Q91Y19 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha11Q91Y19 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.49■□□□□ 0.23
Pcdha11Q91Y19 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Pcdha11Q91Y19 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha11Q91Y19 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha11Q91Y19 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha11Q91Y19 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha11Q91Y19 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Pcdha11Q91Y19 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha11Q91Y19 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha11Q91Y19 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha11Q91Y19 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha11Q91Y19 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Pcdha11Q91Y19 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdha11Q91Y19 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha11Q91Y19 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha11Q91Y19 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha11Q91Y19 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Pcdha11Q91Y19 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Pcdha11Q91Y19 Gm19164-201ENSMUST00000210667 640 ntBASIC16.48■□□□□ 0.23
Pcdha11Q91Y19 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha11Q91Y19 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha11Q91Y19 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.48■□□□□ 0.23
Pcdha11Q91Y19 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha11Q91Y19 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha11Q91Y19 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha11Q91Y19 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha11Q91Y19 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Pcdha11Q91Y19 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha11Q91Y19 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha11Q91Y19 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 Mir5126-201ENSMUST00000175513 77 ntBASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha11Q91Y19 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha11Q91Y19 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha11Q91Y19 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha11Q91Y19 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pcdha11Q91Y19 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha11Q91Y19 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha11Q91Y19 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha11Q91Y19 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha11Q91Y19 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha11Q91Y19 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Pcdha11Q91Y19 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdha11Q91Y19 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.46■□□□□ 0.23
Pcdha11Q91Y19 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Pcdha11Q91Y19 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha11Q91Y19 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha11Q91Y19 AV026068-213ENSMUST00000223675 1171 ntBASIC16.46■□□□□ 0.23
Pcdha11Q91Y19 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha11Q91Y19 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha11Q91Y19 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha11Q91Y19 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pcdha11Q91Y19 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha11Q91Y19 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha11Q91Y19 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdha11Q91Y19 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha11Q91Y19 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms