Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm25406-201ENSMUST00000157599 105 ntBASIC16.42■□□□□ 0.22
Pcdha3Q91Y16 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.42■□□□□ 0.22
Pcdha3Q91Y16 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha3Q91Y16 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha3Q91Y16 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha3Q91Y16 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha3Q91Y16 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha3Q91Y16 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pcdha3Q91Y16 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdha3Q91Y16 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha3Q91Y16 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha3Q91Y16 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha3Q91Y16 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Pcdha3Q91Y16 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha3Q91Y16 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.41■□□□□ 0.22
Pcdha3Q91Y16 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Pcdha3Q91Y16 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha3Q91Y16 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha3Q91Y16 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha3Q91Y16 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pcdha3Q91Y16 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pcdha3Q91Y16 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha3Q91Y16 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha3Q91Y16 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha3Q91Y16 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha3Q91Y16 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha3Q91Y16 Gm25745-201ENSMUST00000174945 133 ntBASIC16.41■□□□□ 0.22
Pcdha3Q91Y16 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha3Q91Y16 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.41■□□□□ 0.22
Pcdha3Q91Y16 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha3Q91Y16 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Pcdha3Q91Y16 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.41■□□□□ 0.22
Pcdha3Q91Y16 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdha3Q91Y16 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha3Q91Y16 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha3Q91Y16 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha3Q91Y16 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pcdha3Q91Y16 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha3Q91Y16 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Pcdha3Q91Y16 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdha3Q91Y16 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.4■□□□□ 0.22
Pcdha3Q91Y16 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha3Q91Y16 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha3Q91Y16 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha3Q91Y16 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha3Q91Y16 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pcdha3Q91Y16 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdha3Q91Y16 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha3Q91Y16 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha3Q91Y16 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pcdha3Q91Y16 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha3Q91Y16 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha3Q91Y16 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Pcdha3Q91Y16 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha3Q91Y16 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha3Q91Y16 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
Pcdha3Q91Y16 Gm12497-201ENSMUST00000138778 237 ntBASIC16.39■□□□□ 0.21
Pcdha3Q91Y16 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha3Q91Y16 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha3Q91Y16 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha3Q91Y16 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha3Q91Y16 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha3Q91Y16 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Pcdha3Q91Y16 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha3Q91Y16 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha3Q91Y16 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha3Q91Y16 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha3Q91Y16 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha3Q91Y16 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha3Q91Y16 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha3Q91Y16 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Pcdha3Q91Y16 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha3Q91Y16 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pcdha3Q91Y16 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pcdha3Q91Y16 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha3Q91Y16 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha3Q91Y16 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha3Q91Y16 Mir8098-201ENSMUST00000184011 137 ntBASIC16.38■□□□□ 0.21
Pcdha3Q91Y16 Gm28659-201ENSMUST00000188013 759 ntBASIC16.38■□□□□ 0.21
Pcdha3Q91Y16 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.38■□□□□ 0.21
Pcdha3Q91Y16 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Pcdha3Q91Y16 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha3Q91Y16 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha3Q91Y16 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha3Q91Y16 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha3Q91Y16 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha3Q91Y16 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha3Q91Y16 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdha3Q91Y16 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.38■□□□□ 0.21
Pcdha3Q91Y16 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha3Q91Y16 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
Pcdha3Q91Y16 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha3Q91Y16 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdha3Q91Y16 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha3Q91Y16 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha3Q91Y16 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha3Q91Y16 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha3Q91Y16 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha3Q91Y16 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdha3Q91Y16 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms