Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.33■□□□□ 0.2
Pcdhb1Q91Y08 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Pcdhb1Q91Y08 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb1Q91Y08 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb1Q91Y08 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb1Q91Y08 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb1Q91Y08 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb1Q91Y08 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Pcdhb1Q91Y08 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb1Q91Y08 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Pcdhb1Q91Y08 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb1Q91Y08 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb1Q91Y08 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb1Q91Y08 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdhb1Q91Y08 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb1Q91Y08 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdhb1Q91Y08 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb1Q91Y08 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb1Q91Y08 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb1Q91Y08 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb1Q91Y08 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhb1Q91Y08 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdhb1Q91Y08 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb1Q91Y08 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb1Q91Y08 Gm12497-201ENSMUST00000138778 237 ntBASIC16.32■□□□□ 0.2
Pcdhb1Q91Y08 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdhb1Q91Y08 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdhb1Q91Y08 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhb1Q91Y08 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb1Q91Y08 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb1Q91Y08 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Pcdhb1Q91Y08 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.32■□□□□ 0.2
Pcdhb1Q91Y08 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb1Q91Y08 Asic1-205ENSMUST00000228185 1818 ntBASIC16.32■□□□□ 0.2
Pcdhb1Q91Y08 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb1Q91Y08 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb1Q91Y08 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb1Q91Y08 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb1Q91Y08 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb1Q91Y08 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb1Q91Y08 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb1Q91Y08 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb1Q91Y08 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb1Q91Y08 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb1Q91Y08 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb1Q91Y08 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb1Q91Y08 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb1Q91Y08 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb1Q91Y08 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb1Q91Y08 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb1Q91Y08 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb1Q91Y08 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb1Q91Y08 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.31■□□□□ 0.2
Pcdhb1Q91Y08 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.31■□□□□ 0.2
Pcdhb1Q91Y08 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdhb1Q91Y08 Gm18669-201ENSMUST00000216049 778 ntBASIC16.31■□□□□ 0.2
Pcdhb1Q91Y08 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Pcdhb1Q91Y08 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb1Q91Y08 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb1Q91Y08 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb1Q91Y08 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb1Q91Y08 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb1Q91Y08 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb1Q91Y08 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdhb1Q91Y08 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdhb1Q91Y08 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb1Q91Y08 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb1Q91Y08 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb1Q91Y08 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb1Q91Y08 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdhb1Q91Y08 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb1Q91Y08 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb1Q91Y08 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb1Q91Y08 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb1Q91Y08 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb1Q91Y08 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pcdhb1Q91Y08 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb1Q91Y08 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb1Q91Y08 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb1Q91Y08 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pcdhb1Q91Y08 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.3■□□□□ 0.2
Pcdhb1Q91Y08 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pcdhb1Q91Y08 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Pcdhb1Q91Y08 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.3■□□□□ 0.2
Pcdhb1Q91Y08 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb1Q91Y08 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb1Q91Y08 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb1Q91Y08 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.3■□□□□ 0.2
Pcdhb1Q91Y08 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb1Q91Y08 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.3■□□□□ 0.2
Pcdhb1Q91Y08 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb1Q91Y08 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb1Q91Y08 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb1Q91Y08 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb1Q91Y08 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhb1Q91Y08 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb1Q91Y08 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pcdhb1Q91Y08 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pcdhb1Q91Y08 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb1Q91Y08 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms