Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb4Q91XZ6 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb4Q91XZ6 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb4Q91XZ6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb4Q91XZ6 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 Gm6345-202ENSMUST00000180900 204 ntBASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb4Q91XZ6 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb4Q91XZ6 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb4Q91XZ6 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdhb4Q91XZ6 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb4Q91XZ6 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb4Q91XZ6 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb4Q91XZ6 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb4Q91XZ6 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdhb4Q91XZ6 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb4Q91XZ6 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb4Q91XZ6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.62■□□□□ 0.09
Pcdhb4Q91XZ6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb4Q91XZ6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb4Q91XZ6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb4Q91XZ6 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb4Q91XZ6 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.62■□□□□ 0.09
Pcdhb4Q91XZ6 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb4Q91XZ6 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb4Q91XZ6 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb4Q91XZ6 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Pcdhb4Q91XZ6 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb4Q91XZ6 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb4Q91XZ6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb4Q91XZ6 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb4Q91XZ6 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb4Q91XZ6 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Pcdhb4Q91XZ6 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.61■□□□□ 0.09
Pcdhb4Q91XZ6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb4Q91XZ6 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb4Q91XZ6 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb4Q91XZ6 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
Pcdhb4Q91XZ6 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb4Q91XZ6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb4Q91XZ6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdhb4Q91XZ6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdhb4Q91XZ6 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Pcdhb4Q91XZ6 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.61■□□□□ 0.09
Pcdhb4Q91XZ6 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb4Q91XZ6 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb4Q91XZ6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb4Q91XZ6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb4Q91XZ6 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb4Q91XZ6 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb4Q91XZ6 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb4Q91XZ6 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb4Q91XZ6 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdhb4Q91XZ6 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb4Q91XZ6 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb4Q91XZ6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Mir7071-201ENSMUST00000184847 69 ntBASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Pcdhb4Q91XZ6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms