Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb5Q91XZ5 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb5Q91XZ5 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb5Q91XZ5 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhb5Q91XZ5 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb5Q91XZ5 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb5Q91XZ5 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb5Q91XZ5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb5Q91XZ5 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb5Q91XZ5 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb5Q91XZ5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb5Q91XZ5 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb5Q91XZ5 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb5Q91XZ5 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb5Q91XZ5 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb5Q91XZ5 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhb5Q91XZ5 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb5Q91XZ5 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb5Q91XZ5 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Pcdhb5Q91XZ5 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Pcdhb5Q91XZ5 Gm11025-201ENSMUST00000140773 466 ntBASIC18.44■□□□□ 0.54
Pcdhb5Q91XZ5 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb5Q91XZ5 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.44■□□□□ 0.54
Pcdhb5Q91XZ5 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb5Q91XZ5 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb5Q91XZ5 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdhb5Q91XZ5 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb5Q91XZ5 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb5Q91XZ5 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb5Q91XZ5 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb5Q91XZ5 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhb5Q91XZ5 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb5Q91XZ5 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb5Q91XZ5 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.43■□□□□ 0.54
Pcdhb5Q91XZ5 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.43■□□□□ 0.54
Pcdhb5Q91XZ5 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhb5Q91XZ5 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb5Q91XZ5 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb5Q91XZ5 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.43■□□□□ 0.54
Pcdhb5Q91XZ5 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.43■□□□□ 0.54
Pcdhb5Q91XZ5 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC18.43■□□□□ 0.54
Pcdhb5Q91XZ5 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb5Q91XZ5 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb5Q91XZ5 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb5Q91XZ5 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb5Q91XZ5 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb5Q91XZ5 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb5Q91XZ5 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb5Q91XZ5 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhb5Q91XZ5 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.43■□□□□ 0.54
Pcdhb5Q91XZ5 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhb5Q91XZ5 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhb5Q91XZ5 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb5Q91XZ5 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Pcdhb5Q91XZ5 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb5Q91XZ5 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb5Q91XZ5 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb5Q91XZ5 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb5Q91XZ5 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb5Q91XZ5 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb5Q91XZ5 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb5Q91XZ5 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb5Q91XZ5 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb5Q91XZ5 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb5Q91XZ5 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb5Q91XZ5 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb5Q91XZ5 Gm14701-201ENSMUST00000117156 348 ntBASIC18.42■□□□□ 0.54
Pcdhb5Q91XZ5 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdhb5Q91XZ5 Gm5177-201ENSMUST00000183092 997 ntBASIC18.42■□□□□ 0.54
Pcdhb5Q91XZ5 Gm45747-201ENSMUST00000212203 999 ntBASIC18.42■□□□□ 0.54
Pcdhb5Q91XZ5 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb5Q91XZ5 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.42■□□□□ 0.54
Pcdhb5Q91XZ5 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb5Q91XZ5 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb5Q91XZ5 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb5Q91XZ5 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb5Q91XZ5 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhb5Q91XZ5 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb5Q91XZ5 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Pcdhb5Q91XZ5 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhb5Q91XZ5 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhb5Q91XZ5 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb5Q91XZ5 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb5Q91XZ5 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb5Q91XZ5 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdhb5Q91XZ5 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb5Q91XZ5 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb5Q91XZ5 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC18.41■□□□□ 0.54
Pcdhb5Q91XZ5 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb5Q91XZ5 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb5Q91XZ5 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb5Q91XZ5 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.41■□□□□ 0.54
Pcdhb5Q91XZ5 Gm27301-201ENSMUST00000184012 127 ntBASIC18.41■□□□□ 0.54
Pcdhb5Q91XZ5 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdhb5Q91XZ5 Gm18246-201ENSMUST00000221023 728 ntBASIC18.41■□□□□ 0.54
Pcdhb5Q91XZ5 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.41■□□□□ 0.54
Pcdhb5Q91XZ5 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb5Q91XZ5 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb5Q91XZ5 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb5Q91XZ5 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms