Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga3Q91XY5 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga3Q91XY5 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga3Q91XY5 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga3Q91XY5 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga3Q91XY5 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga3Q91XY5 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga3Q91XY5 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga3Q91XY5 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga3Q91XY5 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga3Q91XY5 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga3Q91XY5 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga3Q91XY5 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Pcdhga3Q91XY5 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga3Q91XY5 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga3Q91XY5 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga3Q91XY5 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga3Q91XY5 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga3Q91XY5 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga3Q91XY5 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga3Q91XY5 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga3Q91XY5 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga3Q91XY5 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga3Q91XY5 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga3Q91XY5 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga3Q91XY5 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga3Q91XY5 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga3Q91XY5 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga3Q91XY5 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga3Q91XY5 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga3Q91XY5 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga3Q91XY5 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Pcdhga3Q91XY5 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Pcdhga3Q91XY5 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga3Q91XY5 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga3Q91XY5 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.02□□□□□ -0.17
Pcdhga3Q91XY5 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga3Q91XY5 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Pcdhga3Q91XY5 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Pcdhga3Q91XY5 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga3Q91XY5 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga3Q91XY5 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Pcdhga3Q91XY5 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga3Q91XY5 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga3Q91XY5 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga3Q91XY5 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.02□□□□□ -0.17
Pcdhga3Q91XY5 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.02□□□□□ -0.17
Pcdhga3Q91XY5 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga3Q91XY5 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.01□□□□□ -0.17
Pcdhga3Q91XY5 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhga3Q91XY5 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga3Q91XY5 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdhga3Q91XY5 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhga3Q91XY5 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdhga3Q91XY5 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga3Q91XY5 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga3Q91XY5 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga3Q91XY5 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga3Q91XY5 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.01□□□□□ -0.17
Pcdhga3Q91XY5 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga3Q91XY5 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga3Q91XY5 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga3Q91XY5 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga3Q91XY5 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdhga3Q91XY5 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga3Q91XY5 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdhga3Q91XY5 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
Pcdhga3Q91XY5 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga3Q91XY5 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga3Q91XY5 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga3Q91XY5 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga3Q91XY5 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga3Q91XY5 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga3Q91XY5 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga3Q91XY5 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga3Q91XY5 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga3Q91XY5 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga3Q91XY5 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga3Q91XY5 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pcdhga3Q91XY5 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga3Q91XY5 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga3Q91XY5 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga3Q91XY5 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga3Q91XY5 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga3Q91XY5 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga3Q91XY5 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Pcdhga3Q91XY5 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga3Q91XY5 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14□□□□□ -0.17
Pcdhga3Q91XY5 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga3Q91XY5 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga3Q91XY5 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga3Q91XY5 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga3Q91XY5 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga3Q91XY5 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga3Q91XY5 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga3Q91XY5 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga3Q91XY5 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga3Q91XY5 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pcdhga3Q91XY5 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga3Q91XY5 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms