Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx41Q91VN6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ddx41Q91VN6 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx41Q91VN6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx41Q91VN6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Gm18206-201ENSMUST00000207027 926 ntBASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx41Q91VN6 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Gm13418-201ENSMUST00000119097 944 ntBASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Gm12350-201ENSMUST00000121208 462 ntBASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Gm4535-201ENSMUST00000182274 558 ntBASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Gm10355-201ENSMUST00000097146 517 ntBASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx41Q91VN6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx41Q91VN6 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx41Q91VN6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.97■□□□□ 0.47
Ddx41Q91VN6 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ddx41Q91VN6 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.97■□□□□ 0.47
Ddx41Q91VN6 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx41Q91VN6 Gm1401-201ENSMUST00000122048 772 ntBASIC17.97■□□□□ 0.47
Ddx41Q91VN6 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.97■□□□□ 0.47
Ddx41Q91VN6 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.97■□□□□ 0.47
Ddx41Q91VN6 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx41Q91VN6 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx41Q91VN6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx41Q91VN6 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx41Q91VN6 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx41Q91VN6 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx41Q91VN6 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx41Q91VN6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx41Q91VN6 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx41Q91VN6 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx41Q91VN6 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ddx41Q91VN6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx41Q91VN6 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx41Q91VN6 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Ddx41Q91VN6 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ddx41Q91VN6 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx41Q91VN6 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx41Q91VN6 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx41Q91VN6 Gm25990-201ENSMUST00000102440 86 ntBASIC17.96■□□□□ 0.47
Ddx41Q91VN6 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.96■□□□□ 0.47
Ddx41Q91VN6 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx41Q91VN6 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Ddx41Q91VN6 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms