Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb17Q91VD8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb17Q91VD8 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb17Q91VD8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb17Q91VD8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Gm12752-201ENSMUST00000121657 811 ntBASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Gm17790-201ENSMUST00000191545 1228 ntBASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Gm44357-201ENSMUST00000195897 142 ntBASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Gm19658-201ENSMUST00000196231 138 ntBASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Gm44367-201ENSMUST00000196836 138 ntBASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Gm44350-201ENSMUST00000197197 138 ntBASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Gm44390-201ENSMUST00000197533 144 ntBASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Gm44313-201ENSMUST00000198018 138 ntBASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Gm44486-201ENSMUST00000198508 138 ntBASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Gm44314-201ENSMUST00000199263 138 ntBASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Gm44394-201ENSMUST00000199558 138 ntBASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Gm44484-201ENSMUST00000199873 138 ntBASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Gm44466-201ENSMUST00000200264 138 ntBASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Gm44359-201ENSMUST00000200671 138 ntBASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Gm8655-201ENSMUST00000221159 852 ntBASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb17Q91VD8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb17Q91VD8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb17Q91VD8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb17Q91VD8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhb17Q91VD8 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb17Q91VD8 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.34■□□□□ 0.21
Pcdhb17Q91VD8 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhb17Q91VD8 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhb17Q91VD8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb17Q91VD8 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.34■□□□□ 0.21
Pcdhb17Q91VD8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb17Q91VD8 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb17Q91VD8 Gm8097-201ENSMUST00000117903 829 ntBASIC16.34■□□□□ 0.21
Pcdhb17Q91VD8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.34■□□□□ 0.21
Pcdhb17Q91VD8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.34■□□□□ 0.21
Pcdhb17Q91VD8 Gm5656-201ENSMUST00000171020 1096 ntBASIC16.34■□□□□ 0.21
Pcdhb17Q91VD8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb17Q91VD8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.34■□□□□ 0.21
Pcdhb17Q91VD8 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb17Q91VD8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb17Q91VD8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb17Q91VD8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb17Q91VD8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb17Q91VD8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Pcdhb17Q91VD8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb17Q91VD8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb17Q91VD8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb17Q91VD8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb17Q91VD8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb17Q91VD8 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb17Q91VD8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb17Q91VD8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb17Q91VD8 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.33■□□□□ 0.2
Pcdhb17Q91VD8 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb17Q91VD8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Pcdhb17Q91VD8 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms