Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb11Q91UZ8 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhb11Q91UZ8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb11Q91UZ8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb11Q91UZ8 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhb11Q91UZ8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb11Q91UZ8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb11Q91UZ8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb11Q91UZ8 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb11Q91UZ8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.08■□□□□ 0.17
Pcdhb11Q91UZ8 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Pcdhb11Q91UZ8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb11Q91UZ8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb11Q91UZ8 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Pcdhb11Q91UZ8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb11Q91UZ8 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb11Q91UZ8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Pcdhb11Q91UZ8 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Pcdhb11Q91UZ8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb11Q91UZ8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.08■□□□□ 0.16
Pcdhb11Q91UZ8 Gm43347-201ENSMUST00000200226 580 ntBASIC16.08■□□□□ 0.16
Pcdhb11Q91UZ8 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdhb11Q91UZ8 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdhb11Q91UZ8 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb11Q91UZ8 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb11Q91UZ8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb11Q91UZ8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb11Q91UZ8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb11Q91UZ8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb11Q91UZ8 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb11Q91UZ8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdhb11Q91UZ8 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb11Q91UZ8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdhb11Q91UZ8 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb11Q91UZ8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb11Q91UZ8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb11Q91UZ8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb11Q91UZ8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdhb11Q91UZ8 Gm18622-201ENSMUST00000219361 595 ntBASIC16.07■□□□□ 0.16
Pcdhb11Q91UZ8 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb11Q91UZ8 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.07■□□□□ 0.16
Pcdhb11Q91UZ8 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb11Q91UZ8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb11Q91UZ8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb11Q91UZ8 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb11Q91UZ8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb11Q91UZ8 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb11Q91UZ8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdhb11Q91UZ8 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb11Q91UZ8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb11Q91UZ8 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb11Q91UZ8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb11Q91UZ8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb11Q91UZ8 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb11Q91UZ8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Gm7153-201ENSMUST00000117092 455 ntBASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Gm44357-201ENSMUST00000195897 142 ntBASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Gm19658-201ENSMUST00000196231 138 ntBASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Gm44367-201ENSMUST00000196836 138 ntBASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Gm44350-201ENSMUST00000197197 138 ntBASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Gm44390-201ENSMUST00000197533 144 ntBASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Gm44313-201ENSMUST00000198018 138 ntBASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Gm44486-201ENSMUST00000198508 138 ntBASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Gm44314-201ENSMUST00000199263 138 ntBASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Gm44394-201ENSMUST00000199558 138 ntBASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Gm44484-201ENSMUST00000199873 138 ntBASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Gm44466-201ENSMUST00000200264 138 ntBASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Gm44359-201ENSMUST00000200671 138 ntBASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Gm8655-201ENSMUST00000221159 852 ntBASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb11Q91UZ8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb11Q91UZ8 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb11Q91UZ8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms