Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H1fooQ8VIK3 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H1fooQ8VIK3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
H1fooQ8VIK3 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
H1fooQ8VIK3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
H1fooQ8VIK3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H1fooQ8VIK3 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.18□□□□□ -0.3
H1fooQ8VIK3 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H1fooQ8VIK3 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.18□□□□□ -0.3
H1fooQ8VIK3 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
H1fooQ8VIK3 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H1fooQ8VIK3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
H1fooQ8VIK3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H1fooQ8VIK3 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H1fooQ8VIK3 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H1fooQ8VIK3 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H1fooQ8VIK3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
H1fooQ8VIK3 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H1fooQ8VIK3 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
H1fooQ8VIK3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H1fooQ8VIK3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
H1fooQ8VIK3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
H1fooQ8VIK3 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
H1fooQ8VIK3 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H1fooQ8VIK3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.18□□□□□ -0.3
H1fooQ8VIK3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Gm15794-201ENSMUST00000120182 631 ntBASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H1fooQ8VIK3 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.16□□□□□ -0.3
H1fooQ8VIK3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H1fooQ8VIK3 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H1fooQ8VIK3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H1fooQ8VIK3 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
H1fooQ8VIK3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H1fooQ8VIK3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H1fooQ8VIK3 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
H1fooQ8VIK3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H1fooQ8VIK3 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.16□□□□□ -0.3
H1fooQ8VIK3 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H1fooQ8VIK3 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
H1fooQ8VIK3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.16□□□□□ -0.3
H1fooQ8VIK3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
H1fooQ8VIK3 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.16□□□□□ -0.3
H1fooQ8VIK3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.16□□□□□ -0.3
H1fooQ8VIK3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
H1fooQ8VIK3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H1fooQ8VIK3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H1fooQ8VIK3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
H1fooQ8VIK3 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.16□□□□□ -0.3
H1fooQ8VIK3 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H1fooQ8VIK3 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.16□□□□□ -0.3
H1fooQ8VIK3 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
H1fooQ8VIK3 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
H1fooQ8VIK3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
H1fooQ8VIK3 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H1fooQ8VIK3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H1fooQ8VIK3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
H1fooQ8VIK3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms