Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim60Q8VI40 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trim60Q8VI40 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim60Q8VI40 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim60Q8VI40 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim60Q8VI40 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim60Q8VI40 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim60Q8VI40 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim60Q8VI40 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim60Q8VI40 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim60Q8VI40 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.27■□□□□ 0.2
Trim60Q8VI40 Sybu-209ENSMUST00000228639 4113 ntBASIC16.27■□□□□ 0.2
Trim60Q8VI40 Gm10013-201ENSMUST00000106074 672 ntBASIC16.27■□□□□ 0.2
Trim60Q8VI40 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim60Q8VI40 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.27■□□□□ 0.2
Trim60Q8VI40 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim60Q8VI40 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim60Q8VI40 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trim60Q8VI40 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim60Q8VI40 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim60Q8VI40 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim60Q8VI40 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim60Q8VI40 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim60Q8VI40 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim60Q8VI40 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim60Q8VI40 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim60Q8VI40 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Trim60Q8VI40 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim60Q8VI40 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim60Q8VI40 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim60Q8VI40 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim60Q8VI40 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim60Q8VI40 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim60Q8VI40 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim60Q8VI40 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.26■□□□□ 0.19
Trim60Q8VI40 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim60Q8VI40 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim60Q8VI40 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim60Q8VI40 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim60Q8VI40 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trim60Q8VI40 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim60Q8VI40 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim60Q8VI40 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim60Q8VI40 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.26■□□□□ 0.19
Trim60Q8VI40 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim60Q8VI40 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trim60Q8VI40 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim60Q8VI40 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim60Q8VI40 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim60Q8VI40 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim60Q8VI40 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim60Q8VI40 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim60Q8VI40 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.25■□□□□ 0.19
Trim60Q8VI40 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trim60Q8VI40 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trim60Q8VI40 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trim60Q8VI40 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim60Q8VI40 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim60Q8VI40 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim60Q8VI40 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim60Q8VI40 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim60Q8VI40 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim60Q8VI40 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim60Q8VI40 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim60Q8VI40 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim60Q8VI40 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim60Q8VI40 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim60Q8VI40 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim60Q8VI40 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trim60Q8VI40 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim60Q8VI40 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Trim60Q8VI40 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim60Q8VI40 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim60Q8VI40 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim60Q8VI40 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim60Q8VI40 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim60Q8VI40 Gm13836-201ENSMUST00000121159 501 ntBASIC16.24■□□□□ 0.19
Trim60Q8VI40 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Trim60Q8VI40 Gm7977-201ENSMUST00000193787 748 ntBASIC16.24■□□□□ 0.19
Trim60Q8VI40 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim60Q8VI40 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim60Q8VI40 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim60Q8VI40 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim60Q8VI40 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim60Q8VI40 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim60Q8VI40 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim60Q8VI40 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim60Q8VI40 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim60Q8VI40 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim60Q8VI40 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim60Q8VI40 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim60Q8VI40 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim60Q8VI40 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.23■□□□□ 0.19
Trim60Q8VI40 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim60Q8VI40 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trim60Q8VI40 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim60Q8VI40 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim60Q8VI40 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim60Q8VI40 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.23■□□□□ 0.19
Trim60Q8VI40 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms