Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rab40bQ8VHP8 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rab40bQ8VHP8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab40bQ8VHP8 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rab40bQ8VHP8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rab40bQ8VHP8 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Rab40bQ8VHP8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab40bQ8VHP8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rab40bQ8VHP8 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab40bQ8VHP8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab40bQ8VHP8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Rab40bQ8VHP8 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.15□□□□□ -0.14
Rab40bQ8VHP8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab40bQ8VHP8 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab40bQ8VHP8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Rab40bQ8VHP8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.15□□□□□ -0.14
Rab40bQ8VHP8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.15□□□□□ -0.14
Rab40bQ8VHP8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab40bQ8VHP8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab40bQ8VHP8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab40bQ8VHP8 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab40bQ8VHP8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab40bQ8VHP8 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab40bQ8VHP8 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab40bQ8VHP8 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab40bQ8VHP8 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab40bQ8VHP8 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab40bQ8VHP8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.15□□□□□ -0.15
Rab40bQ8VHP8 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40bQ8VHP8 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40bQ8VHP8 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40bQ8VHP8 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40bQ8VHP8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40bQ8VHP8 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.14□□□□□ -0.15
Rab40bQ8VHP8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.14□□□□□ -0.15
Rab40bQ8VHP8 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rab40bQ8VHP8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40bQ8VHP8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40bQ8VHP8 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rab40bQ8VHP8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40bQ8VHP8 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40bQ8VHP8 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Rab40bQ8VHP8 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40bQ8VHP8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40bQ8VHP8 Gm10653-202ENSMUST00000139570 835 ntBASIC14.14□□□□□ -0.15
Rab40bQ8VHP8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.14□□□□□ -0.15
Rab40bQ8VHP8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40bQ8VHP8 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.14□□□□□ -0.15
Rab40bQ8VHP8 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40bQ8VHP8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40bQ8VHP8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40bQ8VHP8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40bQ8VHP8 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40bQ8VHP8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40bQ8VHP8 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rab40bQ8VHP8 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40bQ8VHP8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40bQ8VHP8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40bQ8VHP8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40bQ8VHP8 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.13□□□□□ -0.15
Rab40bQ8VHP8 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40bQ8VHP8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40bQ8VHP8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40bQ8VHP8 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40bQ8VHP8 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rab40bQ8VHP8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40bQ8VHP8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40bQ8VHP8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.13□□□□□ -0.15
Rab40bQ8VHP8 Gm26039-201ENSMUST00000158152 144 ntBASIC14.13□□□□□ -0.15
Rab40bQ8VHP8 Gm6257-201ENSMUST00000163864 910 ntBASIC14.13□□□□□ -0.15
Rab40bQ8VHP8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40bQ8VHP8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.13□□□□□ -0.15
Rab40bQ8VHP8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40bQ8VHP8 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.13□□□□□ -0.15
Rab40bQ8VHP8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40bQ8VHP8 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rab40bQ8VHP8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40bQ8VHP8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40bQ8VHP8 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40bQ8VHP8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40bQ8VHP8 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40bQ8VHP8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab40bQ8VHP8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rab40bQ8VHP8 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.13□□□□□ -0.15
Rab40bQ8VHP8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rab40bQ8VHP8 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab40bQ8VHP8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab40bQ8VHP8 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rab40bQ8VHP8 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rab40bQ8VHP8 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rab40bQ8VHP8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Rab40bQ8VHP8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Rab40bQ8VHP8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.12□□□□□ -0.15
Rab40bQ8VHP8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rab40bQ8VHP8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.12□□□□□ -0.15
Rab40bQ8VHP8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab40bQ8VHP8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.12□□□□□ -0.15
Rab40bQ8VHP8 Mir1668-201ENSMUST00000184114 107 ntBASIC14.12□□□□□ -0.15
Rab40bQ8VHP8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.12□□□□□ -0.15
Rab40bQ8VHP8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms