Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dnajc28Q8VCE1 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dnajc28Q8VCE1 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Dnajc28Q8VCE1 Gm13036-201ENSMUST00000117799 748 ntBASIC17.13■□□□□ 0.33
Dnajc28Q8VCE1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Dnajc28Q8VCE1 Gm27702-201ENSMUST00000184512 56 ntBASIC17.13■□□□□ 0.33
Dnajc28Q8VCE1 Gm27628-201ENSMUST00000184911 107 ntBASIC17.13■□□□□ 0.33
Dnajc28Q8VCE1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Dnajc28Q8VCE1 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.13■□□□□ 0.33
Dnajc28Q8VCE1 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dnajc28Q8VCE1 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dnajc28Q8VCE1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dnajc28Q8VCE1 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dnajc28Q8VCE1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Dnajc28Q8VCE1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Dnajc28Q8VCE1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dnajc28Q8VCE1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dnajc28Q8VCE1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dnajc28Q8VCE1 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Dnajc28Q8VCE1 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 Gm14140-201ENSMUST00000119999 995 ntBASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnajc28Q8VCE1 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnajc28Q8VCE1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.11■□□□□ 0.33
Dnajc28Q8VCE1 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnajc28Q8VCE1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnajc28Q8VCE1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.11■□□□□ 0.33
Dnajc28Q8VCE1 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnajc28Q8VCE1 Gm7222-201ENSMUST00000117512 906 ntBASIC17.11■□□□□ 0.33
Dnajc28Q8VCE1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Dnajc28Q8VCE1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.11■□□□□ 0.33
Dnajc28Q8VCE1 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.11■□□□□ 0.33
Dnajc28Q8VCE1 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Dnajc28Q8VCE1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.11■□□□□ 0.33
Dnajc28Q8VCE1 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.11■□□□□ 0.33
Dnajc28Q8VCE1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnajc28Q8VCE1 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnajc28Q8VCE1 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnajc28Q8VCE1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnajc28Q8VCE1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnajc28Q8VCE1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnajc28Q8VCE1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnajc28Q8VCE1 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Dnajc28Q8VCE1 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.11■□□□□ 0.33
Dnajc28Q8VCE1 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnajc28Q8VCE1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnajc28Q8VCE1 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnajc28Q8VCE1 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnajc28Q8VCE1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Dnajc28Q8VCE1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.1■□□□□ 0.33
Dnajc28Q8VCE1 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Dnajc28Q8VCE1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnajc28Q8VCE1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.1■□□□□ 0.33
Dnajc28Q8VCE1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Dnajc28Q8VCE1 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnajc28Q8VCE1 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Dnajc28Q8VCE1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.1■□□□□ 0.33
Dnajc28Q8VCE1 Gm6736-201ENSMUST00000166583 948 ntBASIC17.1■□□□□ 0.33
Dnajc28Q8VCE1 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Dnajc28Q8VCE1 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Dnajc28Q8VCE1 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Dnajc28Q8VCE1 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.1■□□□□ 0.33
Dnajc28Q8VCE1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnajc28Q8VCE1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnajc28Q8VCE1 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnajc28Q8VCE1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnajc28Q8VCE1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Dnajc28Q8VCE1 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnajc28Q8VCE1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Dnajc28Q8VCE1 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnajc28Q8VCE1 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnajc28Q8VCE1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnajc28Q8VCE1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms