Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ndc1Q8VCB1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ndc1Q8VCB1 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ndc1Q8VCB1 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ndc1Q8VCB1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ndc1Q8VCB1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ndc1Q8VCB1 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ndc1Q8VCB1 Gm11780-201ENSMUST00000136880 516 ntBASIC14.81□□□□□ -0.04
Ndc1Q8VCB1 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.81□□□□□ -0.04
Ndc1Q8VCB1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.81□□□□□ -0.04
Ndc1Q8VCB1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.81□□□□□ -0.04
Ndc1Q8VCB1 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ndc1Q8VCB1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ndc1Q8VCB1 Gm6089-201ENSMUST00000197666 938 ntBASIC14.81□□□□□ -0.04
Ndc1Q8VCB1 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ndc1Q8VCB1 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Ndc1Q8VCB1 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.81□□□□□ -0.04
Ndc1Q8VCB1 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ndc1Q8VCB1 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ndc1Q8VCB1 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ndc1Q8VCB1 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.81□□□□□ -0.04
Ndc1Q8VCB1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ndc1Q8VCB1 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ndc1Q8VCB1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ndc1Q8VCB1 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ndc1Q8VCB1 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ndc1Q8VCB1 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ndc1Q8VCB1 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ndc1Q8VCB1 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.8□□□□□ -0.04
Ndc1Q8VCB1 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ndc1Q8VCB1 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ndc1Q8VCB1 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ndc1Q8VCB1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ndc1Q8VCB1 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ndc1Q8VCB1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ndc1Q8VCB1 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ndc1Q8VCB1 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ndc1Q8VCB1 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ndc1Q8VCB1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ndc1Q8VCB1 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.8□□□□□ -0.04
Ndc1Q8VCB1 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ndc1Q8VCB1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ndc1Q8VCB1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ndc1Q8VCB1 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ndc1Q8VCB1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ndc1Q8VCB1 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ndc1Q8VCB1 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.79□□□□□ -0.04
Ndc1Q8VCB1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ndc1Q8VCB1 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ndc1Q8VCB1 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.79□□□□□ -0.04
Ndc1Q8VCB1 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.79□□□□□ -0.04
Ndc1Q8VCB1 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ndc1Q8VCB1 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ndc1Q8VCB1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.79□□□□□ -0.04
Ndc1Q8VCB1 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ndc1Q8VCB1 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.79□□□□□ -0.04
Ndc1Q8VCB1 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.79□□□□□ -0.04
Ndc1Q8VCB1 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ndc1Q8VCB1 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ndc1Q8VCB1 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ndc1Q8VCB1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ndc1Q8VCB1 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.79□□□□□ -0.04
Ndc1Q8VCB1 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.79□□□□□ -0.04
Ndc1Q8VCB1 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.79□□□□□ -0.04
Ndc1Q8VCB1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ndc1Q8VCB1 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ndc1Q8VCB1 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ndc1Q8VCB1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ndc1Q8VCB1 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.79□□□□□ -0.04
Ndc1Q8VCB1 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ndc1Q8VCB1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ndc1Q8VCB1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ndc1Q8VCB1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ndc1Q8VCB1 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.79□□□□□ -0.04
Ndc1Q8VCB1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.78□□□□□ -0.04
Ndc1Q8VCB1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms