Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Top1mtQ8R4U6 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.8■□□□□ 0.6
Top1mtQ8R4U6 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Top1mtQ8R4U6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Top1mtQ8R4U6 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Top1mtQ8R4U6 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Top1mtQ8R4U6 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Top1mtQ8R4U6 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
Top1mtQ8R4U6 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Top1mtQ8R4U6 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Top1mtQ8R4U6 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.79■□□□□ 0.6
Top1mtQ8R4U6 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.79■□□□□ 0.6
Top1mtQ8R4U6 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Top1mtQ8R4U6 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Top1mtQ8R4U6 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Top1mtQ8R4U6 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Top1mtQ8R4U6 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Top1mtQ8R4U6 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Top1mtQ8R4U6 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Top1mtQ8R4U6 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Top1mtQ8R4U6 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Top1mtQ8R4U6 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Top1mtQ8R4U6 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.78■□□□□ 0.6
Top1mtQ8R4U6 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Top1mtQ8R4U6 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Top1mtQ8R4U6 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Top1mtQ8R4U6 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.78■□□□□ 0.6
Top1mtQ8R4U6 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Top1mtQ8R4U6 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Top1mtQ8R4U6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Top1mtQ8R4U6 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.78■□□□□ 0.6
Top1mtQ8R4U6 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.78■□□□□ 0.6
Top1mtQ8R4U6 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.78■□□□□ 0.6
Top1mtQ8R4U6 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Top1mtQ8R4U6 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Top1mtQ8R4U6 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.78■□□□□ 0.6
Top1mtQ8R4U6 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.78■□□□□ 0.6
Top1mtQ8R4U6 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Top1mtQ8R4U6 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Top1mtQ8R4U6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Top1mtQ8R4U6 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Top1mtQ8R4U6 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.77■□□□□ 0.6
Top1mtQ8R4U6 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Top1mtQ8R4U6 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Top1mtQ8R4U6 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Top1mtQ8R4U6 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Top1mtQ8R4U6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.77■□□□□ 0.6
Top1mtQ8R4U6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Top1mtQ8R4U6 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Top1mtQ8R4U6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Top1mtQ8R4U6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Top1mtQ8R4U6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Top1mtQ8R4U6 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Top1mtQ8R4U6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Top1mtQ8R4U6 Gm4459-201ENSMUST00000118750 468 ntBASIC18.77■□□□□ 0.6
Top1mtQ8R4U6 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Top1mtQ8R4U6 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.77■□□□□ 0.6
Top1mtQ8R4U6 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Top1mtQ8R4U6 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Top1mtQ8R4U6 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.77■□□□□ 0.6
Top1mtQ8R4U6 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Top1mtQ8R4U6 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.77■□□□□ 0.59
Top1mtQ8R4U6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Top1mtQ8R4U6 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.76■□□□□ 0.59
Top1mtQ8R4U6 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Top1mtQ8R4U6 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Top1mtQ8R4U6 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Top1mtQ8R4U6 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.76■□□□□ 0.59
Top1mtQ8R4U6 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Top1mtQ8R4U6 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Top1mtQ8R4U6 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Top1mtQ8R4U6 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.76■□□□□ 0.59
Top1mtQ8R4U6 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Top1mtQ8R4U6 Gm12497-201ENSMUST00000138778 237 ntBASIC18.76■□□□□ 0.59
Top1mtQ8R4U6 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.76■□□□□ 0.59
Top1mtQ8R4U6 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Top1mtQ8R4U6 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.76■□□□□ 0.59
Top1mtQ8R4U6 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Top1mtQ8R4U6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Top1mtQ8R4U6 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Top1mtQ8R4U6 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Top1mtQ8R4U6 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Top1mtQ8R4U6 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Top1mtQ8R4U6 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Top1mtQ8R4U6 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.76■□□□□ 0.59
Top1mtQ8R4U6 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Top1mtQ8R4U6 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Top1mtQ8R4U6 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Top1mtQ8R4U6 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Top1mtQ8R4U6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Top1mtQ8R4U6 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Top1mtQ8R4U6 Gm12644-201ENSMUST00000119935 606 ntBASIC18.75■□□□□ 0.59
Top1mtQ8R4U6 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.75■□□□□ 0.59
Top1mtQ8R4U6 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Top1mtQ8R4U6 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.75■□□□□ 0.59
Top1mtQ8R4U6 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.75■□□□□ 0.59
Top1mtQ8R4U6 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Top1mtQ8R4U6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Top1mtQ8R4U6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Top1mtQ8R4U6 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms