Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup35Q8R4R6 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup35Q8R4R6 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup35Q8R4R6 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup35Q8R4R6 Gm16061-201ENSMUST00000122167 857 ntBASIC12.84□□□□□ -0.35
Nup35Q8R4R6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup35Q8R4R6 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.84□□□□□ -0.35
Nup35Q8R4R6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup35Q8R4R6 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nup35Q8R4R6 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup35Q8R4R6 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup35Q8R4R6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup35Q8R4R6 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Nup35Q8R4R6 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Nup35Q8R4R6 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup35Q8R4R6 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup35Q8R4R6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup35Q8R4R6 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup35Q8R4R6 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup35Q8R4R6 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.84□□□□□ -0.35
Nup35Q8R4R6 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.84□□□□□ -0.35
Nup35Q8R4R6 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup35Q8R4R6 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Nup35Q8R4R6 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Nup35Q8R4R6 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Nup35Q8R4R6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nup35Q8R4R6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nup35Q8R4R6 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nup35Q8R4R6 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nup35Q8R4R6 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup35Q8R4R6 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nup35Q8R4R6 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup35Q8R4R6 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nup35Q8R4R6 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.83□□□□□ -0.36
Nup35Q8R4R6 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup35Q8R4R6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nup35Q8R4R6 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.83□□□□□ -0.36
Nup35Q8R4R6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Nup35Q8R4R6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup35Q8R4R6 Gm20760-201ENSMUST00000179197 648 ntBASIC12.83□□□□□ -0.36
Nup35Q8R4R6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Nup35Q8R4R6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.83□□□□□ -0.36
Nup35Q8R4R6 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.83□□□□□ -0.36
Nup35Q8R4R6 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup35Q8R4R6 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.83□□□□□ -0.36
Nup35Q8R4R6 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup35Q8R4R6 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup35Q8R4R6 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup35Q8R4R6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup35Q8R4R6 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup35Q8R4R6 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Nup35Q8R4R6 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup35Q8R4R6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup35Q8R4R6 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup35Q8R4R6 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup35Q8R4R6 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup35Q8R4R6 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Nup35Q8R4R6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup35Q8R4R6 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.81□□□□□ -0.36
Nup35Q8R4R6 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup35Q8R4R6 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup35Q8R4R6 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup35Q8R4R6 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup35Q8R4R6 Gm13168-201ENSMUST00000121771 632 ntBASIC12.81□□□□□ -0.36
Nup35Q8R4R6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms