Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc58Q8R3Q6 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.13□□□□□ -0.15
Ccdc58Q8R3Q6 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc58Q8R3Q6 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc58Q8R3Q6 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 Gm3375-201ENSMUST00000203929 796 ntBASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.12□□□□□ -0.15
Ccdc58Q8R3Q6 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc58Q8R3Q6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms