Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.45■□□□□ 0.54
Gtf3c5Q8R2T8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Gtf3c5Q8R2T8 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gtf3c5Q8R2T8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gtf3c5Q8R2T8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Gtf3c5Q8R2T8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gtf3c5Q8R2T8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gtf3c5Q8R2T8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gtf3c5Q8R2T8 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gtf3c5Q8R2T8 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Gtf3c5Q8R2T8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gtf3c5Q8R2T8 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gtf3c5Q8R2T8 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gtf3c5Q8R2T8 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.44■□□□□ 0.54
Gtf3c5Q8R2T8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gtf3c5Q8R2T8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gtf3c5Q8R2T8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gtf3c5Q8R2T8 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gtf3c5Q8R2T8 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.44■□□□□ 0.54
Gtf3c5Q8R2T8 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gtf3c5Q8R2T8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Gtf3c5Q8R2T8 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gtf3c5Q8R2T8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gtf3c5Q8R2T8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Gtf3c5Q8R2T8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gtf3c5Q8R2T8 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Gtf3c5Q8R2T8 Gm6257-201ENSMUST00000163864 910 ntBASIC18.44■□□□□ 0.54
Gtf3c5Q8R2T8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.44■□□□□ 0.54
Gtf3c5Q8R2T8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.44■□□□□ 0.54
Gtf3c5Q8R2T8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gtf3c5Q8R2T8 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.44■□□□□ 0.54
Gtf3c5Q8R2T8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.44■□□□□ 0.54
Gtf3c5Q8R2T8 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gtf3c5Q8R2T8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Gtf3c5Q8R2T8 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Gtf3c5Q8R2T8 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Gtf3c5Q8R2T8 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gtf3c5Q8R2T8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gtf3c5Q8R2T8 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Gtf3c5Q8R2T8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gtf3c5Q8R2T8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gtf3c5Q8R2T8 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gtf3c5Q8R2T8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Gtf3c5Q8R2T8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Gtf3c5Q8R2T8 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Gtf3c5Q8R2T8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Gtf3c5Q8R2T8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Gtf3c5Q8R2T8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.43■□□□□ 0.54
Gtf3c5Q8R2T8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.43■□□□□ 0.54
Gtf3c5Q8R2T8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Gtf3c5Q8R2T8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gtf3c5Q8R2T8 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gtf3c5Q8R2T8 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gtf3c5Q8R2T8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gtf3c5Q8R2T8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gtf3c5Q8R2T8 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf3c5Q8R2T8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf3c5Q8R2T8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf3c5Q8R2T8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Gtf3c5Q8R2T8 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf3c5Q8R2T8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf3c5Q8R2T8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf3c5Q8R2T8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf3c5Q8R2T8 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf3c5Q8R2T8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.42■□□□□ 0.54
Gtf3c5Q8R2T8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf3c5Q8R2T8 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf3c5Q8R2T8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf3c5Q8R2T8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf3c5Q8R2T8 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf3c5Q8R2T8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf3c5Q8R2T8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Gtf3c5Q8R2T8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Gtf3c5Q8R2T8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf3c5Q8R2T8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf3c5Q8R2T8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf3c5Q8R2T8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Gtf3c5Q8R2T8 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gtf3c5Q8R2T8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gtf3c5Q8R2T8 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gtf3c5Q8R2T8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gtf3c5Q8R2T8 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Gtf3c5Q8R2T8 Gm27459-201ENSMUST00000184860 107 ntBASIC18.41■□□□□ 0.54
Gtf3c5Q8R2T8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Gtf3c5Q8R2T8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gtf3c5Q8R2T8 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gtf3c5Q8R2T8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gtf3c5Q8R2T8 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Gtf3c5Q8R2T8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gtf3c5Q8R2T8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gtf3c5Q8R2T8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf3c5Q8R2T8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Gtf3c5Q8R2T8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf3c5Q8R2T8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf3c5Q8R2T8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf3c5Q8R2T8 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf3c5Q8R2T8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf3c5Q8R2T8 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf3c5Q8R2T8 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.4■□□□□ 0.54
Gtf3c5Q8R2T8 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms