Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm45747-201ENSMUST00000212203 999 ntBASIC20.03■□□□□ 0.8
Chmp7Q8R1T1 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp7Q8R1T1 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp7Q8R1T1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp7Q8R1T1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
Chmp7Q8R1T1 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp7Q8R1T1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp7Q8R1T1 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Chmp7Q8R1T1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp7Q8R1T1 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC20.02■□□□□ 0.8
Chmp7Q8R1T1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp7Q8R1T1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC20.02■□□□□ 0.8
Chmp7Q8R1T1 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp7Q8R1T1 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp7Q8R1T1 Gm7286-201ENSMUST00000182691 1007 ntBASIC20.02■□□□□ 0.8
Chmp7Q8R1T1 Gm27301-201ENSMUST00000184012 127 ntBASIC20.02■□□□□ 0.8
Chmp7Q8R1T1 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp7Q8R1T1 Gm8396-201ENSMUST00000057361 823 ntBASIC20.02■□□□□ 0.8
Chmp7Q8R1T1 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Chmp7Q8R1T1 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp7Q8R1T1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp7Q8R1T1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Chmp7Q8R1T1 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp7Q8R1T1 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Chmp7Q8R1T1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.02■□□□□ 0.79
Chmp7Q8R1T1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Chmp7Q8R1T1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Chmp7Q8R1T1 AC119177.1-201ENSMUST00000227647 1332 ntBASIC20.02■□□□□ 0.79
Chmp7Q8R1T1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp7Q8R1T1 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp7Q8R1T1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Chmp7Q8R1T1 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp7Q8R1T1 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Chmp7Q8R1T1 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp7Q8R1T1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp7Q8R1T1 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp7Q8R1T1 Gm15427-201ENSMUST00000117288 531 ntBASIC20.01■□□□□ 0.79
Chmp7Q8R1T1 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC20.01■□□□□ 0.79
Chmp7Q8R1T1 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC20.01■□□□□ 0.79
Chmp7Q8R1T1 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp7Q8R1T1 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp7Q8R1T1 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC20.01■□□□□ 0.79
Chmp7Q8R1T1 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp7Q8R1T1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp7Q8R1T1 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp7Q8R1T1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp7Q8R1T1 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Chmp7Q8R1T1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp7Q8R1T1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp7Q8R1T1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chmp7Q8R1T1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp7Q8R1T1 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp7Q8R1T1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp7Q8R1T1 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chmp7Q8R1T1 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC20■□□□□ 0.79
Chmp7Q8R1T1 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chmp7Q8R1T1 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp7Q8R1T1 Gm18246-201ENSMUST00000221023 728 ntBASIC20■□□□□ 0.79
Chmp7Q8R1T1 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp7Q8R1T1 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp7Q8R1T1 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC20■□□□□ 0.79
Chmp7Q8R1T1 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp7Q8R1T1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp7Q8R1T1 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp7Q8R1T1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp7Q8R1T1 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp7Q8R1T1 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp7Q8R1T1 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp7Q8R1T1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp7Q8R1T1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chmp7Q8R1T1 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp7Q8R1T1 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp7Q8R1T1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Chmp7Q8R1T1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp7Q8R1T1 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.99■□□□□ 0.79
Chmp7Q8R1T1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp7Q8R1T1 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
Chmp7Q8R1T1 Gm12892-201ENSMUST00000117367 1146 ntBASIC19.99■□□□□ 0.79
Chmp7Q8R1T1 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC19.99■□□□□ 0.79
Chmp7Q8R1T1 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp7Q8R1T1 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Chmp7Q8R1T1 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC19.99■□□□□ 0.79
Chmp7Q8R1T1 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp7Q8R1T1 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp7Q8R1T1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp7Q8R1T1 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp7Q8R1T1 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Chmp7Q8R1T1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp7Q8R1T1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp7Q8R1T1 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp7Q8R1T1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp7Q8R1T1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp7Q8R1T1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp7Q8R1T1 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Chmp7Q8R1T1 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Chmp7Q8R1T1 Gm11453-201ENSMUST00000117318 1007 ntBASIC19.98■□□□□ 0.79
Chmp7Q8R1T1 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Chmp7Q8R1T1 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp7Q8R1T1 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC19.98■□□□□ 0.79
Chmp7Q8R1T1 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms