Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn1Q8K445 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Clrn1Q8K445 Dancr-204ENSMUST00000132389 2347 ntBASIC14.84□□□□□ -0.03
Clrn1Q8K445 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn1Q8K445 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn1Q8K445 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn1Q8K445 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn1Q8K445 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Clrn1Q8K445 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn1Q8K445 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn1Q8K445 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.84□□□□□ -0.03
Clrn1Q8K445 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn1Q8K445 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn1Q8K445 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn1Q8K445 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn1Q8K445 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn1Q8K445 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
Clrn1Q8K445 Gm15372-201ENSMUST00000120729 834 ntBASIC14.84□□□□□ -0.03
Clrn1Q8K445 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn1Q8K445 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.84□□□□□ -0.03
Clrn1Q8K445 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn1Q8K445 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn1Q8K445 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn1Q8K445 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn1Q8K445 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn1Q8K445 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn1Q8K445 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn1Q8K445 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn1Q8K445 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.84□□□□□ -0.03
Clrn1Q8K445 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn1Q8K445 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn1Q8K445 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.84□□□□□ -0.03
Clrn1Q8K445 Prob1-201ENSMUST00000097619 3021 ntBASIC14.84□□□□□ -0.03
Clrn1Q8K445 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Clrn1Q8K445 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Clrn1Q8K445 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Clrn1Q8K445 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Clrn1Q8K445 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Clrn1Q8K445 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Clrn1Q8K445 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn1Q8K445 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn1Q8K445 Gm9103-201ENSMUST00000119371 405 ntBASIC14.83□□□□□ -0.04
Clrn1Q8K445 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.83□□□□□ -0.04
Clrn1Q8K445 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.83□□□□□ -0.04
Clrn1Q8K445 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.83□□□□□ -0.04
Clrn1Q8K445 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn1Q8K445 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.83□□□□□ -0.04
Clrn1Q8K445 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.83□□□□□ -0.04
Clrn1Q8K445 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn1Q8K445 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.83□□□□□ -0.04
Clrn1Q8K445 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn1Q8K445 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn1Q8K445 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn1Q8K445 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn1Q8K445 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn1Q8K445 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn1Q8K445 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Clrn1Q8K445 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn1Q8K445 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn1Q8K445 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn1Q8K445 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Clrn1Q8K445 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn1Q8K445 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn1Q8K445 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn1Q8K445 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn1Q8K445 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn1Q8K445 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn1Q8K445 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn1Q8K445 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.82□□□□□ -0.04
Clrn1Q8K445 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.82□□□□□ -0.04
Clrn1Q8K445 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.82□□□□□ -0.04
Clrn1Q8K445 Gm28033-201ENSMUST00000184224 96 ntBASIC14.82□□□□□ -0.04
Clrn1Q8K445 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.82□□□□□ -0.04
Clrn1Q8K445 Gm9172-201ENSMUST00000212092 954 ntBASIC14.82□□□□□ -0.04
Clrn1Q8K445 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn1Q8K445 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Clrn1Q8K445 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn1Q8K445 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn1Q8K445 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn1Q8K445 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn1Q8K445 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Clrn1Q8K445 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn1Q8K445 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn1Q8K445 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn1Q8K445 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn1Q8K445 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Clrn1Q8K445 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn1Q8K445 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clrn1Q8K445 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clrn1Q8K445 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clrn1Q8K445 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clrn1Q8K445 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clrn1Q8K445 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Clrn1Q8K445 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Clrn1Q8K445 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clrn1Q8K445 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clrn1Q8K445 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Clrn1Q8K445 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.81□□□□□ -0.04
Clrn1Q8K445 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clrn1Q8K445 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms