Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn1Q8K0T0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn1Q8K0T0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn1Q8K0T0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn1Q8K0T0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rtn1Q8K0T0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.12■□□□□ 0.49
Rtn1Q8K0T0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.12■□□□□ 0.49
Rtn1Q8K0T0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn1Q8K0T0 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn1Q8K0T0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn1Q8K0T0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn1Q8K0T0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rtn1Q8K0T0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.12■□□□□ 0.49
Rtn1Q8K0T0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.12■□□□□ 0.49
Rtn1Q8K0T0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn1Q8K0T0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn1Q8K0T0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.12■□□□□ 0.49
Rtn1Q8K0T0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.12■□□□□ 0.49
Rtn1Q8K0T0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn1Q8K0T0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn1Q8K0T0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn1Q8K0T0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn1Q8K0T0 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn1Q8K0T0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Rtn1Q8K0T0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn1Q8K0T0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Gm7153-201ENSMUST00000117092 455 ntBASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn1Q8K0T0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn1Q8K0T0 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn1Q8K0T0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn1Q8K0T0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn1Q8K0T0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn1Q8K0T0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn1Q8K0T0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn1Q8K0T0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.1■□□□□ 0.49
Rtn1Q8K0T0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.1■□□□□ 0.49
Rtn1Q8K0T0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.1■□□□□ 0.49
Rtn1Q8K0T0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn1Q8K0T0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn1Q8K0T0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn1Q8K0T0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.1■□□□□ 0.49
Rtn1Q8K0T0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rtn1Q8K0T0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn1Q8K0T0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn1Q8K0T0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Rtn1Q8K0T0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn1Q8K0T0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn1Q8K0T0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Rtn1Q8K0T0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn1Q8K0T0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn1Q8K0T0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rtn1Q8K0T0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn1Q8K0T0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn1Q8K0T0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.09■□□□□ 0.49
Rtn1Q8K0T0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Rtn1Q8K0T0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn1Q8K0T0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn1Q8K0T0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Rtn1Q8K0T0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rtn1Q8K0T0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn1Q8K0T0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.09■□□□□ 0.49
Rtn1Q8K0T0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.09■□□□□ 0.49
Rtn1Q8K0T0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn1Q8K0T0 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn1Q8K0T0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn1Q8K0T0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn1Q8K0T0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn1Q8K0T0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Rtn1Q8K0T0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Rtn1Q8K0T0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms