Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4rl1Q8K0S5 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4rl1Q8K0S5 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4rl1Q8K0S5 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4rl1Q8K0S5 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4rl1Q8K0S5 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.8■□□□□ 0.12
Rtn4rl1Q8K0S5 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtn4rl1Q8K0S5 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 Mir7023-201ENSMUST00000185093 64 ntBASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 Gm2272-201ENSMUST00000194903 582 ntBASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn4rl1Q8K0S5 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.78■□□□□ 0.12
Rtn4rl1Q8K0S5 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4rl1Q8K0S5 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4rl1Q8K0S5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4rl1Q8K0S5 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4rl1Q8K0S5 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.78■□□□□ 0.12
Rtn4rl1Q8K0S5 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.78■□□□□ 0.12
Rtn4rl1Q8K0S5 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.78■□□□□ 0.12
Rtn4rl1Q8K0S5 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.78■□□□□ 0.12
Rtn4rl1Q8K0S5 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4rl1Q8K0S5 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4rl1Q8K0S5 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.78■□□□□ 0.12
Rtn4rl1Q8K0S5 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4rl1Q8K0S5 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4rl1Q8K0S5 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Rtn4rl1Q8K0S5 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.78■□□□□ 0.12
Rtn4rl1Q8K0S5 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.78■□□□□ 0.12
Rtn4rl1Q8K0S5 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rtn4rl1Q8K0S5 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4rl1Q8K0S5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn4rl1Q8K0S5 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.77■□□□□ 0.12
Rtn4rl1Q8K0S5 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
Rtn4rl1Q8K0S5 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn4rl1Q8K0S5 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn4rl1Q8K0S5 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Rtn4rl1Q8K0S5 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.77■□□□□ 0.12
Rtn4rl1Q8K0S5 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn4rl1Q8K0S5 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn4rl1Q8K0S5 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn4rl1Q8K0S5 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Rtn4rl1Q8K0S5 Gm22175-201ENSMUST00000175007 78 ntBASIC15.77■□□□□ 0.12
Rtn4rl1Q8K0S5 Gm18057-201ENSMUST00000208220 503 ntBASIC15.77■□□□□ 0.12
Rtn4rl1Q8K0S5 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn4rl1Q8K0S5 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Rtn4rl1Q8K0S5 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rtn4rl1Q8K0S5 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rtn4rl1Q8K0S5 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rtn4rl1Q8K0S5 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rtn4rl1Q8K0S5 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rtn4rl1Q8K0S5 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
Rtn4rl1Q8K0S5 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rtn4rl1Q8K0S5 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rtn4rl1Q8K0S5 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rtn4rl1Q8K0S5 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rtn4rl1Q8K0S5 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rtn4rl1Q8K0S5 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rtn4rl1Q8K0S5 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rtn4rl1Q8K0S5 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rtn4rl1Q8K0S5 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rtn4rl1Q8K0S5 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rtn4rl1Q8K0S5 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rtn4rl1Q8K0S5 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rtn4rl1Q8K0S5 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.76■□□□□ 0.11
Rtn4rl1Q8K0S5 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rtn4rl1Q8K0S5 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rtn4rl1Q8K0S5 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.76■□□□□ 0.11
Rtn4rl1Q8K0S5 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rtn4rl1Q8K0S5 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rtn4rl1Q8K0S5 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rtn4rl1Q8K0S5 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rtn4rl1Q8K0S5 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms