Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh1Q8CGV4 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh1Q8CGV4 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh1Q8CGV4 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.23■□□□□ 0.03
Rdh1Q8CGV4 Gm11594-201ENSMUST00000122313 162 ntBASIC15.23■□□□□ 0.03
Rdh1Q8CGV4 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.23■□□□□ 0.03
Rdh1Q8CGV4 Gm9727-201ENSMUST00000161387 555 ntBASIC15.23■□□□□ 0.03
Rdh1Q8CGV4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.23■□□□□ 0.03
Rdh1Q8CGV4 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rdh1Q8CGV4 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh1Q8CGV4 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh1Q8CGV4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh1Q8CGV4 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh1Q8CGV4 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh1Q8CGV4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh1Q8CGV4 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh1Q8CGV4 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.23■□□□□ 0.03
Rdh1Q8CGV4 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh1Q8CGV4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh1Q8CGV4 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh1Q8CGV4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rdh1Q8CGV4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh1Q8CGV4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh1Q8CGV4 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh1Q8CGV4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Rdh1Q8CGV4 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.22■□□□□ 0.03
Rdh1Q8CGV4 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh1Q8CGV4 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh1Q8CGV4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh1Q8CGV4 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh1Q8CGV4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh1Q8CGV4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh1Q8CGV4 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.22■□□□□ 0.03
Rdh1Q8CGV4 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.22■□□□□ 0.03
Rdh1Q8CGV4 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh1Q8CGV4 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.22■□□□□ 0.03
Rdh1Q8CGV4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh1Q8CGV4 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.22■□□□□ 0.03
Rdh1Q8CGV4 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rdh1Q8CGV4 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh1Q8CGV4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rdh1Q8CGV4 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh1Q8CGV4 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh1Q8CGV4 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rdh1Q8CGV4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Gm4899-201ENSMUST00000178708 719 ntBASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rdh1Q8CGV4 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.21■□□□□ 0.02
Rdh1Q8CGV4 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rdh1Q8CGV4 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Rdh1Q8CGV4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rdh1Q8CGV4 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rdh1Q8CGV4 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rdh1Q8CGV4 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rdh1Q8CGV4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms