Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc5Q8CG46 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smc5Q8CG46 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc5Q8CG46 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC19.42■□□□□ 0.7
Smc5Q8CG46 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc5Q8CG46 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc5Q8CG46 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc5Q8CG46 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc5Q8CG46 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Smc5Q8CG46 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Smc5Q8CG46 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc5Q8CG46 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc5Q8CG46 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc5Q8CG46 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Smc5Q8CG46 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc5Q8CG46 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc5Q8CG46 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Smc5Q8CG46 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc5Q8CG46 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Smc5Q8CG46 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc5Q8CG46 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc5Q8CG46 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc5Q8CG46 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Smc5Q8CG46 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Smc5Q8CG46 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.41■□□□□ 0.7
Smc5Q8CG46 Gm5587-201ENSMUST00000206270 674 ntBASIC19.41■□□□□ 0.7
Smc5Q8CG46 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.41■□□□□ 0.7
Smc5Q8CG46 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc5Q8CG46 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smc5Q8CG46 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc5Q8CG46 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc5Q8CG46 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc5Q8CG46 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.41■□□□□ 0.7
Smc5Q8CG46 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc5Q8CG46 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc5Q8CG46 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc5Q8CG46 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc5Q8CG46 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc5Q8CG46 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc5Q8CG46 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc5Q8CG46 Gm15794-201ENSMUST00000120182 631 ntBASIC19.4■□□□□ 0.7
Smc5Q8CG46 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smc5Q8CG46 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.4■□□□□ 0.7
Smc5Q8CG46 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Smc5Q8CG46 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc5Q8CG46 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc5Q8CG46 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc5Q8CG46 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Smc5Q8CG46 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smc5Q8CG46 Gm45133-201ENSMUST00000207548 2773 ntBASIC19.4■□□□□ 0.7
Smc5Q8CG46 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc5Q8CG46 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc5Q8CG46 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc5Q8CG46 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc5Q8CG46 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc5Q8CG46 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc5Q8CG46 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smc5Q8CG46 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smc5Q8CG46 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Smc5Q8CG46 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc5Q8CG46 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smc5Q8CG46 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Smc5Q8CG46 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smc5Q8CG46 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc5Q8CG46 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc5Q8CG46 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.39■□□□□ 0.69
Smc5Q8CG46 Gm10252-201ENSMUST00000209541 832 ntBASIC19.39■□□□□ 0.69
Smc5Q8CG46 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc5Q8CG46 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Smc5Q8CG46 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc5Q8CG46 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc5Q8CG46 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Smc5Q8CG46 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc5Q8CG46 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc5Q8CG46 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc5Q8CG46 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc5Q8CG46 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc5Q8CG46 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc5Q8CG46 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc5Q8CG46 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc5Q8CG46 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc5Q8CG46 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smc5Q8CG46 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc5Q8CG46 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smc5Q8CG46 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Smc5Q8CG46 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc5Q8CG46 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.38■□□□□ 0.69
Smc5Q8CG46 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Smc5Q8CG46 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smc5Q8CG46 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc5Q8CG46 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc5Q8CG46 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC19.38■□□□□ 0.69
Smc5Q8CG46 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc5Q8CG46 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC19.38■□□□□ 0.69
Smc5Q8CG46 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smc5Q8CG46 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC19.38■□□□□ 0.69
Smc5Q8CG46 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Smc5Q8CG46 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc5Q8CG46 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc5Q8CG46 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms