Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.53■□□□□ 0.56
Nup88Q8CEC0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Nup88Q8CEC0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
Nup88Q8CEC0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Nup88Q8CEC0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup88Q8CEC0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.53■□□□□ 0.56
Nup88Q8CEC0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
Nup88Q8CEC0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup88Q8CEC0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup88Q8CEC0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup88Q8CEC0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nup88Q8CEC0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.53■□□□□ 0.56
Nup88Q8CEC0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup88Q8CEC0 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup88Q8CEC0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nup88Q8CEC0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nup88Q8CEC0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Nup88Q8CEC0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Nup88Q8CEC0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.52■□□□□ 0.56
Nup88Q8CEC0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nup88Q8CEC0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.52■□□□□ 0.56
Nup88Q8CEC0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nup88Q8CEC0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Nup88Q8CEC0 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
Nup88Q8CEC0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.52■□□□□ 0.56
Nup88Q8CEC0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nup88Q8CEC0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nup88Q8CEC0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nup88Q8CEC0 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
Nup88Q8CEC0 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.52■□□□□ 0.56
Nup88Q8CEC0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.52■□□□□ 0.56
Nup88Q8CEC0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.52■□□□□ 0.56
Nup88Q8CEC0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nup88Q8CEC0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.52■□□□□ 0.56
Nup88Q8CEC0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nup88Q8CEC0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nup88Q8CEC0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Nup88Q8CEC0 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Nup88Q8CEC0 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nup88Q8CEC0 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nup88Q8CEC0 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nup88Q8CEC0 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Nup88Q8CEC0 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nup88Q8CEC0 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nup88Q8CEC0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nup88Q8CEC0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Nup88Q8CEC0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nup88Q8CEC0 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nup88Q8CEC0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nup88Q8CEC0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nup88Q8CEC0 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Nup88Q8CEC0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.51■□□□□ 0.55
Nup88Q8CEC0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nup88Q8CEC0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.51■□□□□ 0.55
Nup88Q8CEC0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nup88Q8CEC0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nup88Q8CEC0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup88Q8CEC0 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup88Q8CEC0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup88Q8CEC0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup88Q8CEC0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nup88Q8CEC0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup88Q8CEC0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup88Q8CEC0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC18.5■□□□□ 0.55
Nup88Q8CEC0 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup88Q8CEC0 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup88Q8CEC0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup88Q8CEC0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nup88Q8CEC0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Nup88Q8CEC0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nup88Q8CEC0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.5■□□□□ 0.55
Nup88Q8CEC0 Gm10052-201ENSMUST00000168019 960 ntBASIC18.5■□□□□ 0.55
Nup88Q8CEC0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup88Q8CEC0 Gm7729-201ENSMUST00000050143 801 ntBASIC18.5■□□□□ 0.55
Nup88Q8CEC0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup88Q8CEC0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup88Q8CEC0 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup88Q8CEC0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup88Q8CEC0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Nup88Q8CEC0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup88Q8CEC0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nup88Q8CEC0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Nup88Q8CEC0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nup88Q8CEC0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup88Q8CEC0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup88Q8CEC0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Nup88Q8CEC0 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.49■□□□□ 0.55
Nup88Q8CEC0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Nup88Q8CEC0 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Nup88Q8CEC0 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Nup88Q8CEC0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.49■□□□□ 0.55
Nup88Q8CEC0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Nup88Q8CEC0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nup88Q8CEC0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nup88Q8CEC0 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nup88Q8CEC0 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.49■□□□□ 0.55
Nup88Q8CEC0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Nup88Q8CEC0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nup88Q8CEC0 Gm12644-201ENSMUST00000119935 606 ntBASIC18.49■□□□□ 0.55
Nup88Q8CEC0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms