Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 App-207ENSMUST00000227737 2827 ntBASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb7Q8CDY9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb7Q8CDY9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb7Q8CDY9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb7Q8CDY9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb7Q8CDY9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb7Q8CDY9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb7Q8CDY9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhb7Q8CDY9 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.81■□□□□ 0.12
Pcdhb7Q8CDY9 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb7Q8CDY9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Pcdhb7Q8CDY9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Pcdhb7Q8CDY9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhb7Q8CDY9 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhb7Q8CDY9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhb7Q8CDY9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pcdhb7Q8CDY9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb7Q8CDY9 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb7Q8CDY9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.8■□□□□ 0.12
Pcdhb7Q8CDY9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhb7Q8CDY9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pcdhb7Q8CDY9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb7Q8CDY9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb7Q8CDY9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb7Q8CDY9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb7Q8CDY9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
Pcdhb7Q8CDY9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb7Q8CDY9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pcdhb7Q8CDY9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Pcdhb7Q8CDY9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb7Q8CDY9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb7Q8CDY9 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.8■□□□□ 0.12
Pcdhb7Q8CDY9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb7Q8CDY9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhb7Q8CDY9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhb7Q8CDY9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb7Q8CDY9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.8■□□□□ 0.12
Pcdhb7Q8CDY9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb7Q8CDY9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhb7Q8CDY9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb7Q8CDY9 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb7Q8CDY9 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhb7Q8CDY9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb7Q8CDY9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb7Q8CDY9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb7Q8CDY9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb7Q8CDY9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb7Q8CDY9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb7Q8CDY9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb7Q8CDY9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb7Q8CDY9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb7Q8CDY9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb7Q8CDY9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhb7Q8CDY9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb7Q8CDY9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhb7Q8CDY9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb7Q8CDY9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb7Q8CDY9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhb7Q8CDY9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb7Q8CDY9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhb7Q8CDY9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb7Q8CDY9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb7Q8CDY9 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.78■□□□□ 0.12
Pcdhb7Q8CDY9 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms