Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 Gm26039-201ENSMUST00000158152 144 ntBASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 Mir6404-201ENSMUST00000183699 94 ntBASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Gm6257-201ENSMUST00000163864 910 ntBASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Mir1668-201ENSMUST00000184114 107 ntBASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Gm30025-201ENSMUST00000218555 728 ntBASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Lysmd4Q8CC84 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Lysmd4Q8CC84 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lysmd4Q8CC84 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lysmd4Q8CC84 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lysmd4Q8CC84 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lysmd4Q8CC84 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lysmd4Q8CC84 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lysmd4Q8CC84 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lysmd4Q8CC84 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Lysmd4Q8CC84 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms