Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shisa4Q8CA71 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shisa4Q8CA71 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Shisa4Q8CA71 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shisa4Q8CA71 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Shisa4Q8CA71 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Shisa4Q8CA71 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.18■□□□□ 0.5
Shisa4Q8CA71 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shisa4Q8CA71 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shisa4Q8CA71 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shisa4Q8CA71 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shisa4Q8CA71 Gm11779-201ENSMUST00000118541 368 ntBASIC18.18■□□□□ 0.5
Shisa4Q8CA71 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.18■□□□□ 0.5
Shisa4Q8CA71 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.18■□□□□ 0.5
Shisa4Q8CA71 Gm45167-201ENSMUST00000208007 322 ntBASIC18.18■□□□□ 0.5
Shisa4Q8CA71 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shisa4Q8CA71 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shisa4Q8CA71 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shisa4Q8CA71 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shisa4Q8CA71 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.18■□□□□ 0.5
Shisa4Q8CA71 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shisa4Q8CA71 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shisa4Q8CA71 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shisa4Q8CA71 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Shisa4Q8CA71 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shisa4Q8CA71 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shisa4Q8CA71 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
Shisa4Q8CA71 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shisa4Q8CA71 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shisa4Q8CA71 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Shisa4Q8CA71 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shisa4Q8CA71 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shisa4Q8CA71 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Shisa4Q8CA71 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.17■□□□□ 0.5
Shisa4Q8CA71 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Shisa4Q8CA71 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shisa4Q8CA71 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shisa4Q8CA71 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shisa4Q8CA71 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Shisa4Q8CA71 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shisa4Q8CA71 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shisa4Q8CA71 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shisa4Q8CA71 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shisa4Q8CA71 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Shisa4Q8CA71 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Gm37153-201ENSMUST00000193637 231 ntBASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa4Q8CA71 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shisa4Q8CA71 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Shisa4Q8CA71 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Shisa4Q8CA71 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shisa4Q8CA71 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shisa4Q8CA71 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.15■□□□□ 0.5
Shisa4Q8CA71 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shisa4Q8CA71 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shisa4Q8CA71 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shisa4Q8CA71 Gm11764-201ENSMUST00000120221 623 ntBASIC18.15■□□□□ 0.5
Shisa4Q8CA71 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.15■□□□□ 0.5
Shisa4Q8CA71 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.15■□□□□ 0.5
Shisa4Q8CA71 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.15■□□□□ 0.5
Shisa4Q8CA71 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shisa4Q8CA71 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Shisa4Q8CA71 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shisa4Q8CA71 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Shisa4Q8CA71 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Shisa4Q8CA71 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Shisa4Q8CA71 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shisa4Q8CA71 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shisa4Q8CA71 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms