Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC19.29■□□□□ 0.68
Ptcd1Q8C2E4 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ptcd1Q8C2E4 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Ptcd1Q8C2E4 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Ptcd1Q8C2E4 Gm5312-201ENSMUST00000203728 547 ntBASIC19.29■□□□□ 0.68
Ptcd1Q8C2E4 AC155252.2-201ENSMUST00000226946 680 ntBASIC19.29■□□□□ 0.68
Ptcd1Q8C2E4 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ptcd1Q8C2E4 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ptcd1Q8C2E4 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ptcd1Q8C2E4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ptcd1Q8C2E4 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ptcd1Q8C2E4 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ptcd1Q8C2E4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Ptcd1Q8C2E4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptcd1Q8C2E4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptcd1Q8C2E4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ptcd1Q8C2E4 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptcd1Q8C2E4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.28■□□□□ 0.68
Ptcd1Q8C2E4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ptcd1Q8C2E4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptcd1Q8C2E4 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptcd1Q8C2E4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptcd1Q8C2E4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptcd1Q8C2E4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptcd1Q8C2E4 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC19.28■□□□□ 0.68
Ptcd1Q8C2E4 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Ptcd1Q8C2E4 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ptcd1Q8C2E4 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptcd1Q8C2E4 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC19.28■□□□□ 0.68
Ptcd1Q8C2E4 Gm7787-201ENSMUST00000216858 688 ntBASIC19.28■□□□□ 0.68
Ptcd1Q8C2E4 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptcd1Q8C2E4 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ptcd1Q8C2E4 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptcd1Q8C2E4 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Ptcd1Q8C2E4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptcd1Q8C2E4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptcd1Q8C2E4 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptcd1Q8C2E4 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ptcd1Q8C2E4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.28■□□□□ 0.68
Ptcd1Q8C2E4 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ptcd1Q8C2E4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ptcd1Q8C2E4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ptcd1Q8C2E4 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ptcd1Q8C2E4 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC19.27■□□□□ 0.68
Ptcd1Q8C2E4 Gm11185-201ENSMUST00000117732 1007 ntBASIC19.27■□□□□ 0.68
Ptcd1Q8C2E4 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ptcd1Q8C2E4 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ptcd1Q8C2E4 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.27■□□□□ 0.68
Ptcd1Q8C2E4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ptcd1Q8C2E4 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.27■□□□□ 0.67
Ptcd1Q8C2E4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Ptcd1Q8C2E4 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ptcd1Q8C2E4 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Mir7036b-201ENSMUST00000184791 63 ntBASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Gm44335-201ENSMUST00000196879 141 ntBASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Gm44297-201ENSMUST00000198304 141 ntBASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Gm44346-201ENSMUST00000198851 141 ntBASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 AC147366.1-201ENSMUST00000227671 852 ntBASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptcd1Q8C2E4 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptcd1Q8C2E4 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptcd1Q8C2E4 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptcd1Q8C2E4 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptcd1Q8C2E4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptcd1Q8C2E4 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptcd1Q8C2E4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptcd1Q8C2E4 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptcd1Q8C2E4 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ptcd1Q8C2E4 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ptcd1Q8C2E4 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC19.25■□□□□ 0.67
Ptcd1Q8C2E4 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC19.25■□□□□ 0.67
Ptcd1Q8C2E4 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptcd1Q8C2E4 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptcd1Q8C2E4 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptcd1Q8C2E4 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms