Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 Gm9013-201ENSMUST00000132939 882 ntBASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim4Q8C1Q6 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Smim4Q8C1Q6 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim4Q8C1Q6 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim4Q8C1Q6 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim4Q8C1Q6 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim4Q8C1Q6 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smim4Q8C1Q6 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim4Q8C1Q6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smim4Q8C1Q6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.18□□□□□ -0.3
Smim4Q8C1Q6 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.18□□□□□ -0.3
Smim4Q8C1Q6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim4Q8C1Q6 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smim4Q8C1Q6 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Smim4Q8C1Q6 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim4Q8C1Q6 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim4Q8C1Q6 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim4Q8C1Q6 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Smim4Q8C1Q6 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim4Q8C1Q6 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Mir770-201ENSMUST00000103252 94 ntBASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Gm10252-201ENSMUST00000209541 832 ntBASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Asic1-205ENSMUST00000228185 1818 ntBASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.17□□□□□ -0.3
Smim4Q8C1Q6 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim4Q8C1Q6 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim4Q8C1Q6 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Smim4Q8C1Q6 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Smim4Q8C1Q6 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Smim4Q8C1Q6 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.16□□□□□ -0.3
Smim4Q8C1Q6 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim4Q8C1Q6 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smim4Q8C1Q6 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim4Q8C1Q6 Gm6623-201ENSMUST00000173570 544 ntBASIC13.16□□□□□ -0.3
Smim4Q8C1Q6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim4Q8C1Q6 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Smim4Q8C1Q6 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Smim4Q8C1Q6 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms