Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf2Q8BZT2 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Sh3rf2Q8BZT2 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf2Q8BZT2 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf2Q8BZT2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf2Q8BZT2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf2Q8BZT2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf2Q8BZT2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Sh3rf2Q8BZT2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
Sh3rf2Q8BZT2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf2Q8BZT2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Sh3rf2Q8BZT2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Sh3rf2Q8BZT2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf2Q8BZT2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf2Q8BZT2 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.89■□□□□ 0.13
Sh3rf2Q8BZT2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf2Q8BZT2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf2Q8BZT2 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Sh3rf2Q8BZT2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.89■□□□□ 0.13
Sh3rf2Q8BZT2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf2Q8BZT2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf2Q8BZT2 Gm27300-201ENSMUST00000184085 97 ntBASIC15.89■□□□□ 0.13
Sh3rf2Q8BZT2 Gm27335-201ENSMUST00000184758 97 ntBASIC15.89■□□□□ 0.13
Sh3rf2Q8BZT2 Gm9682-201ENSMUST00000197505 556 ntBASIC15.89■□□□□ 0.13
Sh3rf2Q8BZT2 Gm7787-201ENSMUST00000216858 688 ntBASIC15.89■□□□□ 0.13
Sh3rf2Q8BZT2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf2Q8BZT2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf2Q8BZT2 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.89■□□□□ 0.13
Sh3rf2Q8BZT2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf2Q8BZT2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Sh3rf2Q8BZT2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf2Q8BZT2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf2Q8BZT2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf2Q8BZT2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf2Q8BZT2 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf2Q8BZT2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf2Q8BZT2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf2Q8BZT2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.88■□□□□ 0.13
Sh3rf2Q8BZT2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Sh3rf2Q8BZT2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf2Q8BZT2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.88■□□□□ 0.13
Sh3rf2Q8BZT2 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Sh3rf2Q8BZT2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.88■□□□□ 0.13
Sh3rf2Q8BZT2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf2Q8BZT2 Gm6736-201ENSMUST00000166583 948 ntBASIC15.88■□□□□ 0.13
Sh3rf2Q8BZT2 Gm18489-201ENSMUST00000172565 551 ntBASIC15.88■□□□□ 0.13
Sh3rf2Q8BZT2 Mir3113-201ENSMUST00000175478 76 ntBASIC15.88■□□□□ 0.13
Sh3rf2Q8BZT2 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.88■□□□□ 0.13
Sh3rf2Q8BZT2 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.88■□□□□ 0.13
Sh3rf2Q8BZT2 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.88■□□□□ 0.13
Sh3rf2Q8BZT2 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf2Q8BZT2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf2Q8BZT2 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf2Q8BZT2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf2Q8BZT2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf2Q8BZT2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf2Q8BZT2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf2Q8BZT2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf2Q8BZT2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf2Q8BZT2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Sh3rf2Q8BZT2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Sh3rf2Q8BZT2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Sh3rf2Q8BZT2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Sh3rf2Q8BZT2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sh3rf2Q8BZT2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Sh3rf2Q8BZT2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Sh3rf2Q8BZT2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.87■□□□□ 0.13
Sh3rf2Q8BZT2 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sh3rf2Q8BZT2 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sh3rf2Q8BZT2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sh3rf2Q8BZT2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Sh3rf2Q8BZT2 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.87■□□□□ 0.13
Sh3rf2Q8BZT2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sh3rf2Q8BZT2 Gm24513-201ENSMUST00000174964 138 ntBASIC15.87■□□□□ 0.13
Sh3rf2Q8BZT2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Sh3rf2Q8BZT2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sh3rf2Q8BZT2 Mir8117-201ENSMUST00000184773 107 ntBASIC15.87■□□□□ 0.13
Sh3rf2Q8BZT2 Gm2756-201ENSMUST00000195851 400 ntBASIC15.87■□□□□ 0.13
Sh3rf2Q8BZT2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sh3rf2Q8BZT2 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.87■□□□□ 0.13
Sh3rf2Q8BZT2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Sh3rf2Q8BZT2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sh3rf2Q8BZT2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sh3rf2Q8BZT2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.87■□□□□ 0.13
Sh3rf2Q8BZT2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sh3rf2Q8BZT2 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
Sh3rf2Q8BZT2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 Gm27397-201ENSMUST00000184997 107 ntBASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 Gm43575-201ENSMUST00000196420 516 ntBASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms