Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Gm8000-201ENSMUST00000188378 592 ntBASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap1Q8BTW8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.88□□□□□ -0.03
Cdk5rap1Q8BTW8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap1Q8BTW8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap1Q8BTW8 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.88□□□□□ -0.03
Cdk5rap1Q8BTW8 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cdk5rap1Q8BTW8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap1Q8BTW8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap1Q8BTW8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap1Q8BTW8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap1Q8BTW8 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap1Q8BTW8 Gm5682-201ENSMUST00000173402 505 ntBASIC14.88□□□□□ -0.03
Cdk5rap1Q8BTW8 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap1Q8BTW8 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap1Q8BTW8 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.88□□□□□ -0.03
Cdk5rap1Q8BTW8 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap1Q8BTW8 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap1Q8BTW8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap1Q8BTW8 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cdk5rap1Q8BTW8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap1Q8BTW8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap1Q8BTW8 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap1Q8BTW8 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap1Q8BTW8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap1Q8BTW8 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap1Q8BTW8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cdk5rap1Q8BTW8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.86□□□□□ -0.03
Cdk5rap1Q8BTW8 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk5rap1Q8BTW8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cdk5rap1Q8BTW8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk5rap1Q8BTW8 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms