Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 Gm10052-201ENSMUST00000168019 960 ntBASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 Gm7729-201ENSMUST00000050143 801 ntBASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf4Q8BQZ5 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 App-207ENSMUST00000227737 2827 ntBASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Gm44430-201ENSMUST00000203376 995 ntBASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4Q8BQZ5 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf4Q8BQZ5 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf4Q8BQZ5 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf4Q8BQZ5 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.23■□□□□ 0.03
Cpsf4Q8BQZ5 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Cpsf4Q8BQZ5 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.23■□□□□ 0.03
Cpsf4Q8BQZ5 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Cpsf4Q8BQZ5 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.23■□□□□ 0.03
Cpsf4Q8BQZ5 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms