Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Gm37179-201ENSMUST00000194862 823 ntBASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Il3ra-202ENSMUST00000223589 738 ntBASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smco3Q8BQM7 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smco3Q8BQM7 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smco3Q8BQM7 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smco3Q8BQM7 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smco3Q8BQM7 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smco3Q8BQM7 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
Smco3Q8BQM7 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.97□□□□□ -0.33
Smco3Q8BQM7 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smco3Q8BQM7 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smco3Q8BQM7 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smco3Q8BQM7 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smco3Q8BQM7 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smco3Q8BQM7 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.97□□□□□ -0.33
Smco3Q8BQM7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Smco3Q8BQM7 Gm8495-201ENSMUST00000188740 694 ntBASIC12.97□□□□□ -0.33
Smco3Q8BQM7 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smco3Q8BQM7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smco3Q8BQM7 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smco3Q8BQM7 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smco3Q8BQM7 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smco3Q8BQM7 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Smco3Q8BQM7 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smco3Q8BQM7 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Smco3Q8BQM7 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Smco3Q8BQM7 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Smco3Q8BQM7 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smco3Q8BQM7 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smco3Q8BQM7 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smco3Q8BQM7 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smco3Q8BQM7 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Smco3Q8BQM7 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smco3Q8BQM7 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smco3Q8BQM7 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smco3Q8BQM7 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smco3Q8BQM7 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smco3Q8BQM7 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Smco3Q8BQM7 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Smco3Q8BQM7 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smco3Q8BQM7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smco3Q8BQM7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms