Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Col16a1Q8BLX7 Gm2810-201ENSMUST00000118681 990 ntBASIC20.43■□□□□ 0.86
Col16a1Q8BLX7 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Col16a1Q8BLX7 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC20.43■□□□□ 0.86
Col16a1Q8BLX7 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC20.43■□□□□ 0.86
Col16a1Q8BLX7 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col16a1Q8BLX7 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col16a1Q8BLX7 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col16a1Q8BLX7 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col16a1Q8BLX7 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col16a1Q8BLX7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Col16a1Q8BLX7 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC20.43■□□□□ 0.86
Col16a1Q8BLX7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Col16a1Q8BLX7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col16a1Q8BLX7 Gm29541-201ENSMUST00000191351 678 ntBASIC20.42■□□□□ 0.86
Col16a1Q8BLX7 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Col16a1Q8BLX7 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC20.42■□□□□ 0.86
Col16a1Q8BLX7 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col16a1Q8BLX7 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col16a1Q8BLX7 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Col16a1Q8BLX7 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Col16a1Q8BLX7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col16a1Q8BLX7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Col16a1Q8BLX7 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col16a1Q8BLX7 Gm45293-201ENSMUST00000209754 1812 ntBASIC20.42■□□□□ 0.86
Col16a1Q8BLX7 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col16a1Q8BLX7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Col16a1Q8BLX7 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Col16a1Q8BLX7 Gm6415-201ENSMUST00000118488 348 ntBASIC20.42■□□□□ 0.86
Col16a1Q8BLX7 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Col16a1Q8BLX7 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col16a1Q8BLX7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col16a1Q8BLX7 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col16a1Q8BLX7 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Col16a1Q8BLX7 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col16a1Q8BLX7 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col16a1Q8BLX7 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Col16a1Q8BLX7 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col16a1Q8BLX7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col16a1Q8BLX7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col16a1Q8BLX7 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col16a1Q8BLX7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Col16a1Q8BLX7 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC20.41■□□□□ 0.86
Col16a1Q8BLX7 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC20.41■□□□□ 0.86
Col16a1Q8BLX7 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Col16a1Q8BLX7 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col16a1Q8BLX7 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col16a1Q8BLX7 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col16a1Q8BLX7 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col16a1Q8BLX7 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.4■□□□□ 0.86
Col16a1Q8BLX7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Col16a1Q8BLX7 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC20.4■□□□□ 0.86
Col16a1Q8BLX7 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col16a1Q8BLX7 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Col16a1Q8BLX7 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col16a1Q8BLX7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Col16a1Q8BLX7 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col16a1Q8BLX7 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col16a1Q8BLX7 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Col16a1Q8BLX7 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col16a1Q8BLX7 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col16a1Q8BLX7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col16a1Q8BLX7 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col16a1Q8BLX7 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col16a1Q8BLX7 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Col16a1Q8BLX7 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Col16a1Q8BLX7 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC20.39■□□□□ 0.86
Col16a1Q8BLX7 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Col16a1Q8BLX7 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC20.39■□□□□ 0.85
Col16a1Q8BLX7 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Col16a1Q8BLX7 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Col16a1Q8BLX7 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC20.39■□□□□ 0.85
Col16a1Q8BLX7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col16a1Q8BLX7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col16a1Q8BLX7 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col16a1Q8BLX7 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col16a1Q8BLX7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col16a1Q8BLX7 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Col16a1Q8BLX7 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Col16a1Q8BLX7 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Col16a1Q8BLX7 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Col16a1Q8BLX7 Mir7684-201ENSMUST00000183858 60 ntBASIC20.38■□□□□ 0.85
Col16a1Q8BLX7 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC20.38■□□□□ 0.85
Col16a1Q8BLX7 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col16a1Q8BLX7 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col16a1Q8BLX7 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col16a1Q8BLX7 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col16a1Q8BLX7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col16a1Q8BLX7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Col16a1Q8BLX7 Gm43072-201ENSMUST00000200283 1671 ntBASIC20.38■□□□□ 0.85
Col16a1Q8BLX7 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col16a1Q8BLX7 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col16a1Q8BLX7 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Col16a1Q8BLX7 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC20.38■□□□□ 0.85
Col16a1Q8BLX7 Gtpbp10-211ENSMUST00000198799 648 ntBASIC20.38■□□□□ 0.85
Col16a1Q8BLX7 Gm43767-201ENSMUST00000198933 381 ntBASIC20.38■□□□□ 0.85
Col16a1Q8BLX7 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col16a1Q8BLX7 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col16a1Q8BLX7 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col16a1Q8BLX7 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms