Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Gm28631-201ENSMUST00000190740 334 ntBASIC13.19□□□□□ -0.3
Smg1Q8BKX6 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.19□□□□□ -0.3
Smg1Q8BKX6 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.19□□□□□ -0.3
Smg1Q8BKX6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smg1Q8BKX6 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smg1Q8BKX6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smg1Q8BKX6 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smg1Q8BKX6 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smg1Q8BKX6 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smg1Q8BKX6 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smg1Q8BKX6 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.18□□□□□ -0.3
Smg1Q8BKX6 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smg1Q8BKX6 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.18□□□□□ -0.3
Smg1Q8BKX6 Gm11478-201ENSMUST00000117851 599 ntBASIC13.18□□□□□ -0.3
Smg1Q8BKX6 Gm18057-201ENSMUST00000208220 503 ntBASIC13.18□□□□□ -0.3
Smg1Q8BKX6 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Smg1Q8BKX6 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smg1Q8BKX6 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smg1Q8BKX6 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smg1Q8BKX6 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smg1Q8BKX6 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smg1Q8BKX6 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smg1Q8BKX6 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smg1Q8BKX6 Gm24158-201ENSMUST00000175263 71 ntBASIC13.18□□□□□ -0.3
Smg1Q8BKX6 Mir6404-201ENSMUST00000183699 94 ntBASIC13.18□□□□□ -0.3
Smg1Q8BKX6 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smg1Q8BKX6 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smg1Q8BKX6 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smg1Q8BKX6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smg1Q8BKX6 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Smg1Q8BKX6 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smg1Q8BKX6 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Gm11425-201ENSMUST00000119608 498 ntBASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smg1Q8BKX6 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Smg1Q8BKX6 AY702102-202ENSMUST00000194651 1173 ntBASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Gm9682-201ENSMUST00000197505 556 ntBASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Gm9396-201ENSMUST00000076703 567 ntBASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Gm8344-201ENSMUST00000119813 856 ntBASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Smg1Q8BKX6 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.17□□□□□ -0.3
Smg1Q8BKX6 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Gm9063-201ENSMUST00000223299 582 ntBASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.17□□□□□ -0.3
Smg1Q8BKX6 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Smg1Q8BKX6 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smg1Q8BKX6 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.16□□□□□ -0.3
Smg1Q8BKX6 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.16□□□□□ -0.3
Smg1Q8BKX6 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.16□□□□□ -0.3
Smg1Q8BKX6 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smg1Q8BKX6 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Smg1Q8BKX6 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Smg1Q8BKX6 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smg1Q8BKX6 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smg1Q8BKX6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.16□□□□□ -0.3
Smg1Q8BKX6 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smg1Q8BKX6 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
Smg1Q8BKX6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smg1Q8BKX6 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Smg1Q8BKX6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smg1Q8BKX6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smg1Q8BKX6 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Smg1Q8BKX6 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smg1Q8BKX6 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.16□□□□□ -0.3
Smg1Q8BKX6 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.16□□□□□ -0.3
Smg1Q8BKX6 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smg1Q8BKX6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smg1Q8BKX6 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smg1Q8BKX6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smg1Q8BKX6 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smg1Q8BKX6 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.16□□□□□ -0.3
Smg1Q8BKX6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smg1Q8BKX6 Gm6745-201ENSMUST00000199216 526 ntBASIC13.16□□□□□ -0.3
Smg1Q8BKX6 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.16□□□□□ -0.3
Smg1Q8BKX6 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.16□□□□□ -0.3
Smg1Q8BKX6 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.15□□□□□ -0.3
Smg1Q8BKX6 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.15□□□□□ -0.3
Smg1Q8BKX6 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.15□□□□□ -0.3
Smg1Q8BKX6 Gm7488-201ENSMUST00000117148 684 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms