Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Mir8117-201ENSMUST00000184773 107 ntBASIC16.68■□□□□ 0.26
Usp1Q8BJQ2 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp1Q8BJQ2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp1Q8BJQ2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp1Q8BJQ2 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp1Q8BJQ2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp1Q8BJQ2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Usp1Q8BJQ2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp1Q8BJQ2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp1Q8BJQ2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Usp1Q8BJQ2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp1Q8BJQ2 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Usp1Q8BJQ2 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp1Q8BJQ2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Usp1Q8BJQ2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp1Q8BJQ2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp1Q8BJQ2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp1Q8BJQ2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.67■□□□□ 0.26
Usp1Q8BJQ2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp1Q8BJQ2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp1Q8BJQ2 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Usp1Q8BJQ2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.67■□□□□ 0.26
Usp1Q8BJQ2 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.67■□□□□ 0.26
Usp1Q8BJQ2 Gm5682-201ENSMUST00000173402 505 ntBASIC16.67■□□□□ 0.26
Usp1Q8BJQ2 Gm37153-201ENSMUST00000193637 231 ntBASIC16.67■□□□□ 0.26
Usp1Q8BJQ2 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.67■□□□□ 0.26
Usp1Q8BJQ2 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp1Q8BJQ2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.67■□□□□ 0.26
Usp1Q8BJQ2 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp1Q8BJQ2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Usp1Q8BJQ2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp1Q8BJQ2 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp1Q8BJQ2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Usp1Q8BJQ2 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Usp1Q8BJQ2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp1Q8BJQ2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp1Q8BJQ2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp1Q8BJQ2 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp1Q8BJQ2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Usp1Q8BJQ2 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Usp1Q8BJQ2 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Usp1Q8BJQ2 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Gm23935-201ENSMUST00000102303 57 ntBASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Gm24270-201ENSMUST00000102326 57 ntBASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Gm14822-201ENSMUST00000122247 291 ntBASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Gm24245-201ENSMUST00000157318 57 ntBASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Mir3113-201ENSMUST00000175478 76 ntBASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.66■□□□□ 0.26
Usp1Q8BJQ2 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.65■□□□□ 0.26
Usp1Q8BJQ2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Usp1Q8BJQ2 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp1Q8BJQ2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp1Q8BJQ2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp1Q8BJQ2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Usp1Q8BJQ2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Usp1Q8BJQ2 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Usp1Q8BJQ2 Gm4995-201ENSMUST00000117247 432 ntBASIC16.65■□□□□ 0.26
Usp1Q8BJQ2 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.65■□□□□ 0.26
Usp1Q8BJQ2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Usp1Q8BJQ2 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp1Q8BJQ2 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Usp1Q8BJQ2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Usp1Q8BJQ2 Gm10175-201ENSMUST00000086013 645 ntBASIC16.65■□□□□ 0.26
Usp1Q8BJQ2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp1Q8BJQ2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp1Q8BJQ2 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Usp1Q8BJQ2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Usp1Q8BJQ2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Usp1Q8BJQ2 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.65■□□□□ 0.26
Usp1Q8BJQ2 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Usp1Q8BJQ2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Usp1Q8BJQ2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp1Q8BJQ2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp1Q8BJQ2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp1Q8BJQ2 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp1Q8BJQ2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms