Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trim6Q8BGE7 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim6Q8BGE7 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim6Q8BGE7 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim6Q8BGE7 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim6Q8BGE7 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim6Q8BGE7 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim6Q8BGE7 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim6Q8BGE7 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim6Q8BGE7 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim6Q8BGE7 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim6Q8BGE7 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim6Q8BGE7 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim6Q8BGE7 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim6Q8BGE7 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim6Q8BGE7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim6Q8BGE7 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim6Q8BGE7 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim6Q8BGE7 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim6Q8BGE7 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim6Q8BGE7 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim6Q8BGE7 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim6Q8BGE7 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim6Q8BGE7 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trim6Q8BGE7 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trim6Q8BGE7 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim6Q8BGE7 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.72■□□□□ 0.27
Trim6Q8BGE7 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim6Q8BGE7 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.72■□□□□ 0.27
Trim6Q8BGE7 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim6Q8BGE7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trim6Q8BGE7 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim6Q8BGE7 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim6Q8BGE7 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Trim6Q8BGE7 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim6Q8BGE7 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim6Q8BGE7 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim6Q8BGE7 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Trim6Q8BGE7 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim6Q8BGE7 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim6Q8BGE7 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim6Q8BGE7 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim6Q8BGE7 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim6Q8BGE7 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim6Q8BGE7 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.71■□□□□ 0.27
Trim6Q8BGE7 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim6Q8BGE7 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim6Q8BGE7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim6Q8BGE7 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim6Q8BGE7 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trim6Q8BGE7 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim6Q8BGE7 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim6Q8BGE7 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim6Q8BGE7 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim6Q8BGE7 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trim6Q8BGE7 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trim6Q8BGE7 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trim6Q8BGE7 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim6Q8BGE7 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.7■□□□□ 0.26
Trim6Q8BGE7 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Trim6Q8BGE7 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim6Q8BGE7 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim6Q8BGE7 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim6Q8BGE7 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim6Q8BGE7 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Trim6Q8BGE7 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim6Q8BGE7 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim6Q8BGE7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim6Q8BGE7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim6Q8BGE7 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.7■□□□□ 0.26
Trim6Q8BGE7 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.7■□□□□ 0.26
Trim6Q8BGE7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim6Q8BGE7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim6Q8BGE7 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trim6Q8BGE7 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim6Q8BGE7 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim6Q8BGE7 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim6Q8BGE7 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim6Q8BGE7 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim6Q8BGE7 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim6Q8BGE7 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim6Q8BGE7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim6Q8BGE7 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim6Q8BGE7 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Trim6Q8BGE7 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.7■□□□□ 0.26
Trim6Q8BGE7 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trim6Q8BGE7 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim6Q8BGE7 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim6Q8BGE7 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim6Q8BGE7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim6Q8BGE7 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trim6Q8BGE7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.69■□□□□ 0.26
Trim6Q8BGE7 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.69■□□□□ 0.26
Trim6Q8BGE7 Gm26039-201ENSMUST00000158152 144 ntBASIC16.69■□□□□ 0.26
Trim6Q8BGE7 Mir1668-201ENSMUST00000184114 107 ntBASIC16.69■□□□□ 0.26
Trim6Q8BGE7 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim6Q8BGE7 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.69■□□□□ 0.26
Trim6Q8BGE7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.69■□□□□ 0.26
Trim6Q8BGE7 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trim6Q8BGE7 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms