Protein–RNA interactions for Protein: Q80YX1

Tnc, Tenascin, mousemouse

Predictions only

Length 2,110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TncQ80YX1 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.18□□□□□ -0.3
TncQ80YX1 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.18□□□□□ -0.3
TncQ80YX1 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.18□□□□□ -0.3
TncQ80YX1 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.18□□□□□ -0.3
TncQ80YX1 Gm8825-201ENSMUST00000182565 998 ntBASIC13.18□□□□□ -0.3
TncQ80YX1 Gm4518-201ENSMUST00000182638 718 ntBASIC13.18□□□□□ -0.3
TncQ80YX1 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.18□□□□□ -0.3
TncQ80YX1 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.18□□□□□ -0.3
TncQ80YX1 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.18□□□□□ -0.3
TncQ80YX1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.18□□□□□ -0.3
TncQ80YX1 Gm6550-201ENSMUST00000187574 993 ntBASIC13.18□□□□□ -0.3
TncQ80YX1 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TncQ80YX1 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.18□□□□□ -0.3
TncQ80YX1 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.18□□□□□ -0.3
TncQ80YX1 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TncQ80YX1 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TncQ80YX1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TncQ80YX1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TncQ80YX1 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TncQ80YX1 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TncQ80YX1 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TncQ80YX1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TncQ80YX1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TncQ80YX1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TncQ80YX1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TncQ80YX1 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TncQ80YX1 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TncQ80YX1 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TncQ80YX1 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TncQ80YX1 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TncQ80YX1 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
TncQ80YX1 Gm8344-201ENSMUST00000119813 856 ntBASIC13.18□□□□□ -0.3
TncQ80YX1 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
TncQ80YX1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TncQ80YX1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TncQ80YX1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TncQ80YX1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TncQ80YX1 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TncQ80YX1 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TncQ80YX1 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TncQ80YX1 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TncQ80YX1 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TncQ80YX1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TncQ80YX1 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TncQ80YX1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TncQ80YX1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TncQ80YX1 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TncQ80YX1 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.17□□□□□ -0.3
TncQ80YX1 Gm5682-201ENSMUST00000173402 505 ntBASIC13.17□□□□□ -0.3
TncQ80YX1 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TncQ80YX1 Gm18195-201ENSMUST00000207604 706 ntBASIC13.17□□□□□ -0.3
TncQ80YX1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.17□□□□□ -0.3
TncQ80YX1 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.17□□□□□ -0.3
TncQ80YX1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TncQ80YX1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TncQ80YX1 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TncQ80YX1 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TncQ80YX1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TncQ80YX1 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TncQ80YX1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TncQ80YX1 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.17□□□□□ -0.3
TncQ80YX1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TncQ80YX1 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
TncQ80YX1 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.17□□□□□ -0.3
TncQ80YX1 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TncQ80YX1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TncQ80YX1 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TncQ80YX1 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TncQ80YX1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TncQ80YX1 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
TncQ80YX1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TncQ80YX1 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TncQ80YX1 Gm10060-201ENSMUST00000212002 111 ntBASIC13.16□□□□□ -0.3
TncQ80YX1 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TncQ80YX1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TncQ80YX1 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TncQ80YX1 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TncQ80YX1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.16□□□□□ -0.3
TncQ80YX1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.16□□□□□ -0.3
TncQ80YX1 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TncQ80YX1 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TncQ80YX1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TncQ80YX1 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
TncQ80YX1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TncQ80YX1 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TncQ80YX1 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TncQ80YX1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TncQ80YX1 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.16□□□□□ -0.3
TncQ80YX1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TncQ80YX1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TncQ80YX1 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TncQ80YX1 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TncQ80YX1 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TncQ80YX1 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TncQ80YX1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TncQ80YX1 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TncQ80YX1 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TncQ80YX1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TncQ80YX1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TncQ80YX1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms