Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Gm10052-201ENSMUST00000168019 960 ntBASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Gm7729-201ENSMUST00000050143 801 ntBASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.3□□□□□ -0.28
Upk3bQ80YF6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.3□□□□□ -0.28
Upk3bQ80YF6 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Upk3bQ80YF6 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3bQ80YF6 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Upk3bQ80YF6 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3bQ80YF6 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.29□□□□□ -0.28
Upk3bQ80YF6 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3bQ80YF6 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3bQ80YF6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3bQ80YF6 Gm44430-201ENSMUST00000203376 995 ntBASIC13.29□□□□□ -0.28
Upk3bQ80YF6 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Upk3bQ80YF6 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3bQ80YF6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3bQ80YF6 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3bQ80YF6 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3bQ80YF6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3bQ80YF6 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3bQ80YF6 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3bQ80YF6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3bQ80YF6 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Upk3bQ80YF6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3bQ80YF6 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3bQ80YF6 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk3bQ80YF6 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms