Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.06■□□□□ 0
Otop1Q80VM9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Otop1Q80VM9 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Otop1Q80VM9 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.06■□□□□ 0
Otop1Q80VM9 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.06■□□□□ 0
Otop1Q80VM9 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.06■□□□□ 0
Otop1Q80VM9 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.06■□□□□ 0
Otop1Q80VM9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.06■□□□□ 0
Otop1Q80VM9 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.06■□□□□ 0
Otop1Q80VM9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Otop1Q80VM9 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.06■□□□□ 0
Otop1Q80VM9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.06■□□□□ 0
Otop1Q80VM9 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.06■□□□□ 0
Otop1Q80VM9 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.06■□□□□ 0
Otop1Q80VM9 Gm8825-201ENSMUST00000182565 998 ntBASIC15.06■□□□□ 0
Otop1Q80VM9 Gm4518-201ENSMUST00000182638 718 ntBASIC15.06■□□□□ 0
Otop1Q80VM9 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.06■□□□□ 0
Otop1Q80VM9 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.06■□□□□ 0
Otop1Q80VM9 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.06■□□□□ 0
Otop1Q80VM9 Mir6956-201ENSMUST00000183598 62 ntBASIC15.06■□□□□ 0
Otop1Q80VM9 Mir6404-201ENSMUST00000183699 94 ntBASIC15.06■□□□□ 0
Otop1Q80VM9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.06■□□□□ 0
Otop1Q80VM9 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.06■□□□□ 0
Otop1Q80VM9 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.06■□□□□ 0
Otop1Q80VM9 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Otop1Q80VM9 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Otop1Q80VM9 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.06■□□□□ 0
Otop1Q80VM9 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.06■□□□□ 0
Otop1Q80VM9 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.06■□□□□ 0
Otop1Q80VM9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.06■□□□□ 0
Otop1Q80VM9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Otop1Q80VM9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.06■□□□□ 0
Otop1Q80VM9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Otop1Q80VM9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Otop1Q80VM9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Otop1Q80VM9 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Otop1Q80VM9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Otop1Q80VM9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Otop1Q80VM9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Otop1Q80VM9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.06■□□□□ 0
Otop1Q80VM9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Otop1Q80VM9 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.05■□□□□ 0
Otop1Q80VM9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Otop1Q80VM9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Otop1Q80VM9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Otop1Q80VM9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.05■□□□□ 0
Otop1Q80VM9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
Otop1Q80VM9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Otop1Q80VM9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Otop1Q80VM9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Otop1Q80VM9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.05■□□□□ -0
Otop1Q80VM9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Otop1Q80VM9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Otop1Q80VM9 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.05■□□□□ -0
Otop1Q80VM9 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.05■□□□□ -0
Otop1Q80VM9 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Otop1Q80VM9 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.05■□□□□ -0
Otop1Q80VM9 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.05■□□□□ -0
Otop1Q80VM9 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.05■□□□□ -0
Otop1Q80VM9 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.05■□□□□ -0
Otop1Q80VM9 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Otop1Q80VM9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Otop1Q80VM9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Otop1Q80VM9 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.05■□□□□ -0
Otop1Q80VM9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.05■□□□□ -0
Otop1Q80VM9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Otop1Q80VM9 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Otop1Q80VM9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.05■□□□□ -0
Otop1Q80VM9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.05■□□□□ -0
Otop1Q80VM9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Otop1Q80VM9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Otop1Q80VM9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Otop1Q80VM9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Otop1Q80VM9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Otop1Q80VM9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.05■□□□□ -0
Otop1Q80VM9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Otop1Q80VM9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Otop1Q80VM9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.04■□□□□ -0
Otop1Q80VM9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.04■□□□□ -0
Otop1Q80VM9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.04■□□□□ -0
Otop1Q80VM9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.04■□□□□ -0
Otop1Q80VM9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.04■□□□□ -0
Otop1Q80VM9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Otop1Q80VM9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Otop1Q80VM9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Otop1Q80VM9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Otop1Q80VM9 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.04■□□□□ -0
Otop1Q80VM9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Otop1Q80VM9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.04■□□□□ -0
Otop1Q80VM9 Gm4899-201ENSMUST00000178708 719 ntBASIC15.04■□□□□ -0
Otop1Q80VM9 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Otop1Q80VM9 Gm37153-201ENSMUST00000193637 231 ntBASIC15.04■□□□□ -0
Otop1Q80VM9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Otop1Q80VM9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Otop1Q80VM9 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.04■□□□□ -0
Otop1Q80VM9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Otop1Q80VM9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Otop1Q80VM9 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.04■□□□□ -0
Otop1Q80VM9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Otop1Q80VM9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms