Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Sh3tc2Q80VA5 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.08■□□□□ 0.32
Sh3tc2Q80VA5 Gm18622-201ENSMUST00000219361 595 ntBASIC17.08■□□□□ 0.32
Sh3tc2Q80VA5 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3tc2Q80VA5 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3tc2Q80VA5 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3tc2Q80VA5 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Sh3tc2Q80VA5 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3tc2Q80VA5 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3tc2Q80VA5 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3tc2Q80VA5 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3tc2Q80VA5 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3tc2Q80VA5 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3tc2Q80VA5 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3tc2Q80VA5 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Sh3tc2Q80VA5 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3tc2Q80VA5 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3tc2Q80VA5 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3tc2Q80VA5 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3tc2Q80VA5 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Sh3tc2Q80VA5 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3tc2Q80VA5 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3tc2Q80VA5 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3tc2Q80VA5 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3tc2Q80VA5 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3tc2Q80VA5 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3tc2Q80VA5 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3tc2Q80VA5 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Sh3tc2Q80VA5 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sh3tc2Q80VA5 Gm36967-201ENSMUST00000193814 266 ntBASIC17.07■□□□□ 0.32
Sh3tc2Q80VA5 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.07■□□□□ 0.32
Sh3tc2Q80VA5 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3tc2Q80VA5 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Sh3tc2Q80VA5 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3tc2Q80VA5 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3tc2Q80VA5 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3tc2Q80VA5 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3tc2Q80VA5 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3tc2Q80VA5 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Sh3tc2Q80VA5 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3tc2Q80VA5 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3tc2Q80VA5 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3tc2Q80VA5 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Sh3tc2Q80VA5 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Sh3tc2Q80VA5 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.06■□□□□ 0.32
Sh3tc2Q80VA5 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Sh3tc2Q80VA5 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.06■□□□□ 0.32
Sh3tc2Q80VA5 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.06■□□□□ 0.32
Sh3tc2Q80VA5 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.06■□□□□ 0.32
Sh3tc2Q80VA5 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Sh3tc2Q80VA5 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3tc2Q80VA5 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3tc2Q80VA5 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3tc2Q80VA5 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Sh3tc2Q80VA5 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3tc2Q80VA5 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3tc2Q80VA5 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.06■□□□□ 0.32
Sh3tc2Q80VA5 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3tc2Q80VA5 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3tc2Q80VA5 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3tc2Q80VA5 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3tc2Q80VA5 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3tc2Q80VA5 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3tc2Q80VA5 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3tc2Q80VA5 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sh3tc2Q80VA5 Gm11764-201ENSMUST00000120221 623 ntBASIC17.05■□□□□ 0.32
Sh3tc2Q80VA5 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.05■□□□□ 0.32
Sh3tc2Q80VA5 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.05■□□□□ 0.32
Sh3tc2Q80VA5 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3tc2Q80VA5 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3tc2Q80VA5 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3tc2Q80VA5 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3tc2Q80VA5 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3tc2Q80VA5 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3tc2Q80VA5 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3tc2Q80VA5 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3tc2Q80VA5 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Sh3tc2Q80VA5 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3tc2Q80VA5 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3tc2Q80VA5 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3tc2Q80VA5 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3tc2Q80VA5 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Sh3tc2Q80VA5 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3tc2Q80VA5 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.04■□□□□ 0.32
Sh3tc2Q80VA5 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Sh3tc2Q80VA5 Gm17271-201ENSMUST00000165535 355 ntBASIC17.04■□□□□ 0.32
Sh3tc2Q80VA5 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.04■□□□□ 0.32
Sh3tc2Q80VA5 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Sh3tc2Q80VA5 Gm45167-201ENSMUST00000208007 322 ntBASIC17.04■□□□□ 0.32
Sh3tc2Q80VA5 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.04■□□□□ 0.32
Sh3tc2Q80VA5 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3tc2Q80VA5 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3tc2Q80VA5 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Sh3tc2Q80VA5 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3tc2Q80VA5 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3tc2Q80VA5 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Sh3tc2Q80VA5 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Sh3tc2Q80VA5 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3tc2Q80VA5 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3tc2Q80VA5 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms