Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim62Q80V85 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim62Q80V85 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim62Q80V85 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim62Q80V85 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.23■□□□□ 0.19
Trim62Q80V85 Gm10060-201ENSMUST00000212002 111 ntBASIC16.23■□□□□ 0.19
Trim62Q80V85 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.23■□□□□ 0.19
Trim62Q80V85 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim62Q80V85 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim62Q80V85 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim62Q80V85 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trim62Q80V85 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim62Q80V85 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim62Q80V85 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim62Q80V85 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim62Q80V85 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim62Q80V85 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim62Q80V85 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim62Q80V85 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim62Q80V85 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.23■□□□□ 0.19
Trim62Q80V85 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim62Q80V85 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim62Q80V85 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trim62Q80V85 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.22■□□□□ 0.19
Trim62Q80V85 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim62Q80V85 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trim62Q80V85 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim62Q80V85 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim62Q80V85 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim62Q80V85 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trim62Q80V85 Gm14722-201ENSMUST00000118943 689 ntBASIC16.22■□□□□ 0.19
Trim62Q80V85 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.22■□□□□ 0.19
Trim62Q80V85 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trim62Q80V85 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
Trim62Q80V85 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
Trim62Q80V85 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.22■□□□□ 0.19
Trim62Q80V85 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.22■□□□□ 0.19
Trim62Q80V85 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.22■□□□□ 0.19
Trim62Q80V85 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim62Q80V85 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim62Q80V85 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim62Q80V85 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim62Q80V85 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim62Q80V85 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim62Q80V85 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim62Q80V85 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim62Q80V85 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim62Q80V85 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim62Q80V85 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim62Q80V85 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim62Q80V85 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trim62Q80V85 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.21■□□□□ 0.19
Trim62Q80V85 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Trim62Q80V85 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim62Q80V85 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim62Q80V85 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim62Q80V85 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim62Q80V85 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim62Q80V85 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim62Q80V85 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim62Q80V85 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.21■□□□□ 0.19
Trim62Q80V85 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.21■□□□□ 0.19
Trim62Q80V85 Mzt1-203ENSMUST00000227948 952 ntBASIC16.21■□□□□ 0.19
Trim62Q80V85 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim62Q80V85 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim62Q80V85 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trim62Q80V85 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim62Q80V85 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim62Q80V85 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim62Q80V85 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.21■□□□□ 0.19
Trim62Q80V85 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Trim62Q80V85 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim62Q80V85 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim62Q80V85 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim62Q80V85 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim62Q80V85 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim62Q80V85 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim62Q80V85 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trim62Q80V85 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim62Q80V85 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim62Q80V85 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim62Q80V85 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim62Q80V85 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim62Q80V85 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim62Q80V85 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trim62Q80V85 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.2■□□□□ 0.18
Trim62Q80V85 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trim62Q80V85 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim62Q80V85 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trim62Q80V85 Gm27646-201ENSMUST00000183989 110 ntBASIC16.2■□□□□ 0.18
Trim62Q80V85 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.2■□□□□ 0.18
Trim62Q80V85 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim62Q80V85 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim62Q80V85 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim62Q80V85 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim62Q80V85 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim62Q80V85 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Trim62Q80V85 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trim62Q80V85 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim62Q80V85 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms