Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ush1gQ80T11 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ush1gQ80T11 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ush1gQ80T11 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ush1gQ80T11 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.15■□□□□ 0.34
Ush1gQ80T11 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.15■□□□□ 0.34
Ush1gQ80T11 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.15■□□□□ 0.34
Ush1gQ80T11 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ush1gQ80T11 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ush1gQ80T11 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Ush1gQ80T11 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.14■□□□□ 0.34
Ush1gQ80T11 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ush1gQ80T11 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ush1gQ80T11 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ush1gQ80T11 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ush1gQ80T11 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.14■□□□□ 0.33
Ush1gQ80T11 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ush1gQ80T11 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Ush1gQ80T11 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.14■□□□□ 0.33
Ush1gQ80T11 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ush1gQ80T11 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ush1gQ80T11 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.14■□□□□ 0.33
Ush1gQ80T11 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Ush1gQ80T11 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ush1gQ80T11 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ush1gQ80T11 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ush1gQ80T11 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.14■□□□□ 0.33
Ush1gQ80T11 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ush1gQ80T11 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ush1gQ80T11 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ush1gQ80T11 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ush1gQ80T11 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ush1gQ80T11 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ush1gQ80T11 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ush1gQ80T11 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ush1gQ80T11 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.14■□□□□ 0.33
Ush1gQ80T11 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ush1gQ80T11 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.14■□□□□ 0.33
Ush1gQ80T11 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1gQ80T11 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Gm15920-201ENSMUST00000118998 402 ntBASIC17.13■□□□□ 0.33
Ush1gQ80T11 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1gQ80T11 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.13■□□□□ 0.33
Ush1gQ80T11 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ush1gQ80T11 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1gQ80T11 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1gQ80T11 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1gQ80T11 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1gQ80T11 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1gQ80T11 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1gQ80T11 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1gQ80T11 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ush1gQ80T11 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.12■□□□□ 0.33
Ush1gQ80T11 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1gQ80T11 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.12■□□□□ 0.33
Ush1gQ80T11 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.12■□□□□ 0.33
Ush1gQ80T11 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.12■□□□□ 0.33
Ush1gQ80T11 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.12■□□□□ 0.33
Ush1gQ80T11 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ush1gQ80T11 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.12■□□□□ 0.33
Ush1gQ80T11 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1gQ80T11 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1gQ80T11 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1gQ80T11 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1gQ80T11 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ush1gQ80T11 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1gQ80T11 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1gQ80T11 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1gQ80T11 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1gQ80T11 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ush1gQ80T11 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms