Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC22.03■■□□□ 1.12
ShprhQ7TPQ3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
ShprhQ7TPQ3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
ShprhQ7TPQ3 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
ShprhQ7TPQ3 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC22.03■■□□□ 1.12
ShprhQ7TPQ3 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC22.03■■□□□ 1.12
ShprhQ7TPQ3 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC22.03■■□□□ 1.12
ShprhQ7TPQ3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC22.03■■□□□ 1.12
ShprhQ7TPQ3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
ShprhQ7TPQ3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ShprhQ7TPQ3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ShprhQ7TPQ3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ShprhQ7TPQ3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
ShprhQ7TPQ3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
ShprhQ7TPQ3 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ShprhQ7TPQ3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ShprhQ7TPQ3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ShprhQ7TPQ3 Gm8597-201ENSMUST00000191525 1109 ntBASIC22.02■■□□□ 1.12
ShprhQ7TPQ3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC22.02■■□□□ 1.12
ShprhQ7TPQ3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
ShprhQ7TPQ3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ShprhQ7TPQ3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
ShprhQ7TPQ3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ShprhQ7TPQ3 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ShprhQ7TPQ3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ShprhQ7TPQ3 Gm27920-201ENSMUST00000183953 96 ntBASIC22.01■■□□□ 1.11
ShprhQ7TPQ3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ShprhQ7TPQ3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC22.01■■□□□ 1.11
ShprhQ7TPQ3 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
ShprhQ7TPQ3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ShprhQ7TPQ3 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ShprhQ7TPQ3 Gm42934-201ENSMUST00000196920 1345 ntBASIC22.01■■□□□ 1.11
ShprhQ7TPQ3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
ShprhQ7TPQ3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ShprhQ7TPQ3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
ShprhQ7TPQ3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
ShprhQ7TPQ3 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
ShprhQ7TPQ3 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
ShprhQ7TPQ3 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ShprhQ7TPQ3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC22.01■■□□□ 1.11
ShprhQ7TPQ3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC22.01■■□□□ 1.11
ShprhQ7TPQ3 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ShprhQ7TPQ3 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ShprhQ7TPQ3 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
ShprhQ7TPQ3 AC159621.2-201ENSMUST00000223519 1326 ntBASIC22■■□□□ 1.11
ShprhQ7TPQ3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC22■■□□□ 1.11
ShprhQ7TPQ3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC22■■□□□ 1.11
ShprhQ7TPQ3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC22■■□□□ 1.11
ShprhQ7TPQ3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC22■■□□□ 1.11
ShprhQ7TPQ3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
ShprhQ7TPQ3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ShprhQ7TPQ3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC22■■□□□ 1.11
ShprhQ7TPQ3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC22■■□□□ 1.11
ShprhQ7TPQ3 Gm15483-201ENSMUST00000120338 456 ntBASIC22■■□□□ 1.11
ShprhQ7TPQ3 Gm2423-201ENSMUST00000074863 733 ntBASIC22■■□□□ 1.11
ShprhQ7TPQ3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ShprhQ7TPQ3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ShprhQ7TPQ3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ShprhQ7TPQ3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
ShprhQ7TPQ3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ShprhQ7TPQ3 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ShprhQ7TPQ3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC21.99■■□□□ 1.11
ShprhQ7TPQ3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
ShprhQ7TPQ3 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
ShprhQ7TPQ3 Gm11424-201ENSMUST00000121929 829 ntBASIC21.99■■□□□ 1.11
ShprhQ7TPQ3 Gm18737-201ENSMUST00000173594 937 ntBASIC21.99■■□□□ 1.11
ShprhQ7TPQ3 Gm27437-201ENSMUST00000183429 107 ntBASIC21.99■■□□□ 1.11
ShprhQ7TPQ3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ShprhQ7TPQ3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ShprhQ7TPQ3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
ShprhQ7TPQ3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ShprhQ7TPQ3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ShprhQ7TPQ3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
ShprhQ7TPQ3 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
ShprhQ7TPQ3 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ShprhQ7TPQ3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
ShprhQ7TPQ3 Gm5866-201ENSMUST00000177881 973 ntBASIC21.98■■□□□ 1.11
ShprhQ7TPQ3 Gm27680-201ENSMUST00000184192 160 ntBASIC21.98■■□□□ 1.11
ShprhQ7TPQ3 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ShprhQ7TPQ3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ShprhQ7TPQ3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
ShprhQ7TPQ3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
ShprhQ7TPQ3 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ShprhQ7TPQ3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC21.98■■□□□ 1.11
ShprhQ7TPQ3 Gm8096-201ENSMUST00000209921 1591 ntBASIC21.98■■□□□ 1.11
ShprhQ7TPQ3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ShprhQ7TPQ3 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
ShprhQ7TPQ3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
ShprhQ7TPQ3 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ShprhQ7TPQ3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
ShprhQ7TPQ3 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ShprhQ7TPQ3 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ShprhQ7TPQ3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC21.98■■□□□ 1.11
ShprhQ7TPQ3 Gm5745-201ENSMUST00000183748 313 ntBASIC21.98■■□□□ 1.11
ShprhQ7TPQ3 Gm27306-201ENSMUST00000183970 107 ntBASIC21.98■■□□□ 1.11
ShprhQ7TPQ3 Gm27430-201ENSMUST00000184585 107 ntBASIC21.98■■□□□ 1.11
ShprhQ7TPQ3 Gm44333-201ENSMUST00000197168 107 ntBASIC21.98■■□□□ 1.11
ShprhQ7TPQ3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ShprhQ7TPQ3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ShprhQ7TPQ3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC21.97■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms