Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vma21Q78T54 Gm11355-201ENSMUST00000121120 306 ntBASIC12.82□□□□□ -0.36
Vma21Q78T54 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.82□□□□□ -0.36
Vma21Q78T54 Gm18101-201ENSMUST00000215769 548 ntBASIC12.82□□□□□ -0.36
Vma21Q78T54 Gm21559-201ENSMUST00000220638 855 ntBASIC12.82□□□□□ -0.36
Vma21Q78T54 AC112142.1-201ENSMUST00000228796 918 ntBASIC12.82□□□□□ -0.36
Vma21Q78T54 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vma21Q78T54 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vma21Q78T54 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vma21Q78T54 Gm8587-201ENSMUST00000076538 843 ntBASIC12.82□□□□□ -0.36
Vma21Q78T54 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vma21Q78T54 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vma21Q78T54 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.82□□□□□ -0.36
Vma21Q78T54 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vma21Q78T54 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vma21Q78T54 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vma21Q78T54 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vma21Q78T54 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.82□□□□□ -0.36
Vma21Q78T54 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vma21Q78T54 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vma21Q78T54 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vma21Q78T54 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vma21Q78T54 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Vma21Q78T54 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vma21Q78T54 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21Q78T54 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21Q78T54 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.81□□□□□ -0.36
Vma21Q78T54 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21Q78T54 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vma21Q78T54 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21Q78T54 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21Q78T54 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21Q78T54 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21Q78T54 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21Q78T54 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21Q78T54 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21Q78T54 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21Q78T54 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Vma21Q78T54 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21Q78T54 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.81□□□□□ -0.36
Vma21Q78T54 Gm22697-201ENSMUST00000175194 63 ntBASIC12.81□□□□□ -0.36
Vma21Q78T54 Gm43799-201ENSMUST00000201845 579 ntBASIC12.81□□□□□ -0.36
Vma21Q78T54 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.81□□□□□ -0.36
Vma21Q78T54 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21Q78T54 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21Q78T54 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21Q78T54 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21Q78T54 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21Q78T54 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Vma21Q78T54 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21Q78T54 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21Q78T54 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21Q78T54 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Vma21Q78T54 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.81□□□□□ -0.36
Vma21Q78T54 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21Q78T54 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21Q78T54 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21Q78T54 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vma21Q78T54 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.8□□□□□ -0.36
Vma21Q78T54 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Vma21Q78T54 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Vma21Q78T54 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21Q78T54 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21Q78T54 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Vma21Q78T54 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21Q78T54 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21Q78T54 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21Q78T54 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.8□□□□□ -0.36
Vma21Q78T54 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21Q78T54 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21Q78T54 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21Q78T54 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21Q78T54 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21Q78T54 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Vma21Q78T54 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21Q78T54 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Vma21Q78T54 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.8□□□□□ -0.36
Vma21Q78T54 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21Q78T54 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Vma21Q78T54 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21Q78T54 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21Q78T54 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.8□□□□□ -0.36
Vma21Q78T54 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21Q78T54 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vma21Q78T54 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21Q78T54 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21Q78T54 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Vma21Q78T54 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21Q78T54 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.8□□□□□ -0.36
Vma21Q78T54 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21Q78T54 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.8□□□□□ -0.36
Vma21Q78T54 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21Q78T54 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21Q78T54 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21Q78T54 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21Q78T54 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vma21Q78T54 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.79□□□□□ -0.36
Vma21Q78T54 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Vma21Q78T54 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Vma21Q78T54 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms