Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.79■□□□□ 0.6
Npc1l1Q6T3U4 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.79■□□□□ 0.6
Npc1l1Q6T3U4 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.79■□□□□ 0.6
Npc1l1Q6T3U4 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.79■□□□□ 0.6
Npc1l1Q6T3U4 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Npc1l1Q6T3U4 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Npc1l1Q6T3U4 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Npc1l1Q6T3U4 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Npc1l1Q6T3U4 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.79■□□□□ 0.6
Npc1l1Q6T3U4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Npc1l1Q6T3U4 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Npc1l1Q6T3U4 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Npc1l1Q6T3U4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npc1l1Q6T3U4 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npc1l1Q6T3U4 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npc1l1Q6T3U4 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npc1l1Q6T3U4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npc1l1Q6T3U4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.78■□□□□ 0.6
Npc1l1Q6T3U4 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.78■□□□□ 0.6
Npc1l1Q6T3U4 Gm37153-201ENSMUST00000193637 231 ntBASIC18.78■□□□□ 0.6
Npc1l1Q6T3U4 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npc1l1Q6T3U4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npc1l1Q6T3U4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npc1l1Q6T3U4 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npc1l1Q6T3U4 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npc1l1Q6T3U4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.78■□□□□ 0.6
Npc1l1Q6T3U4 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npc1l1Q6T3U4 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npc1l1Q6T3U4 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npc1l1Q6T3U4 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Npc1l1Q6T3U4 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npc1l1Q6T3U4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npc1l1Q6T3U4 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npc1l1Q6T3U4 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npc1l1Q6T3U4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Npc1l1Q6T3U4 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Npc1l1Q6T3U4 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.77■□□□□ 0.6
Npc1l1Q6T3U4 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Npc1l1Q6T3U4 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Npc1l1Q6T3U4 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Npc1l1Q6T3U4 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.77■□□□□ 0.6
Npc1l1Q6T3U4 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.77■□□□□ 0.6
Npc1l1Q6T3U4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Npc1l1Q6T3U4 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Npc1l1Q6T3U4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.77■□□□□ 0.6
Npc1l1Q6T3U4 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Npc1l1Q6T3U4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Npc1l1Q6T3U4 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Npc1l1Q6T3U4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Npc1l1Q6T3U4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Npc1l1Q6T3U4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Npc1l1Q6T3U4 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Npc1l1Q6T3U4 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Npc1l1Q6T3U4 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Npc1l1Q6T3U4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Npc1l1Q6T3U4 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Npc1l1Q6T3U4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Npc1l1Q6T3U4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Npc1l1Q6T3U4 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.76■□□□□ 0.59
Npc1l1Q6T3U4 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.76■□□□□ 0.59
Npc1l1Q6T3U4 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Npc1l1Q6T3U4 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.76■□□□□ 0.59
Npc1l1Q6T3U4 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npc1l1Q6T3U4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Npc1l1Q6T3U4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Npc1l1Q6T3U4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npc1l1Q6T3U4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npc1l1Q6T3U4 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Npc1l1Q6T3U4 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Npc1l1Q6T3U4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npc1l1Q6T3U4 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npc1l1Q6T3U4 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.76■□□□□ 0.59
Npc1l1Q6T3U4 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.76■□□□□ 0.59
Npc1l1Q6T3U4 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npc1l1Q6T3U4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Npc1l1Q6T3U4 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npc1l1Q6T3U4 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Npc1l1Q6T3U4 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.75■□□□□ 0.59
Npc1l1Q6T3U4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Npc1l1Q6T3U4 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.75■□□□□ 0.59
Npc1l1Q6T3U4 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.75■□□□□ 0.59
Npc1l1Q6T3U4 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Npc1l1Q6T3U4 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Npc1l1Q6T3U4 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Npc1l1Q6T3U4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npc1l1Q6T3U4 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npc1l1Q6T3U4 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npc1l1Q6T3U4 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npc1l1Q6T3U4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npc1l1Q6T3U4 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npc1l1Q6T3U4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npc1l1Q6T3U4 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npc1l1Q6T3U4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Npc1l1Q6T3U4 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.75■□□□□ 0.59
Npc1l1Q6T3U4 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Npc1l1Q6T3U4 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npc1l1Q6T3U4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npc1l1Q6T3U4 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Npc1l1Q6T3U4 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Npc1l1Q6T3U4 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms